Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0826
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   2.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   4.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   4.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   8.6  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.6  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -2

Query: 311 KHSSCTVAASSAPNPDVSGPRGISSTAQFSSRNCTRSPRPRAGSTADR 168
           K S      +S P+P +S   G +  A  +S   + +P P   ST  R
Sbjct: 123 KPSGVISTNTSPPSPILSNRFGENEEADAASNVISSTPLPPTTSTTTR 170


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 241 QAPPSFLHGIAHGLLVPGQDRL 176
           QAPP++ +GI  G+++   D +
Sbjct: 438 QAPPTYDYGIPQGVVLNPLDAI 459


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -3

Query: 241 QAPPSFLHGIAHGLLV 194
           QAPP++ +GI  G+++
Sbjct: 438 QAPPTYDYGIPQGVVL 453


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/48 (18%), Positives = 22/48 (45%)
 Frame = -3

Query: 193 PGQDRLQIDDVTVTPSLSRAMSAXXXXXXTCVPQPTSVAAAPTLNVCA 50
           P  D   ++    +P     +S+        +P P++  A+P+++V +
Sbjct: 670 PEDDAESLNQSISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVAS 717


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/48 (18%), Positives = 22/48 (45%)
 Frame = -3

Query: 193 PGQDRLQIDDVTVTPSLSRAMSAXXXXXXTCVPQPTSVAAAPTLNVCA 50
           P  D   ++    +P     +S+        +P P++  A+P+++V +
Sbjct: 562 PEDDAESLNQSISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVAS 609


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 100 VPQPTSVAAAPTLNV 56
           +P P++ A+ PT+N+
Sbjct: 224 IPTPSTSASPPTVNI 238


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 161 DVIDLQSILPWDEETVCNSVK 223
           DVI ++  L   E+T+CN  K
Sbjct: 289 DVIKVEPELSDSEKTLCNGSK 309


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 337 RVTGWDAPFPHVF 375
           R+ GW+  F H+F
Sbjct: 153 RIFGWNILFGHIF 165


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 14/54 (25%), Positives = 19/54 (35%)
 Frame = -2

Query: 308 HSSCTVAASSAPNPDVSGPRGISSTAQFSSRNCTRSPRPRAGSTADR*RHSDAE 147
           +  CT A+S    P    P G+S  A    +   +  R   G       H  AE
Sbjct: 28  YRDCTTASSWPGRPPKRAPVGLSLAASHLQQQQLKKQRLDNGDYPYENGHMGAE 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,916
Number of Sequences: 336
Number of extensions: 2051
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)