Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0826
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79695-1|CAB01970.1|  366|Caenorhabditis elegans Hypothetical pr...    89   2e-18
AF038606-5|AAB92024.2|  352|Caenorhabditis elegans Hypothetical ...    39   0.002
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical...    27   8.0  
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical...    27   8.0  

>Z79695-1|CAB01970.1|  366|Caenorhabditis elegans Hypothetical
           protein F27D4.5 protein.
          Length = 366

 Score = 89.0 bits (211), Expect = 2e-18
 Identities = 37/61 (60%), Positives = 49/61 (80%)
 Frame = +1

Query: 256 PLTSGFGAELAATVQEECFLHLEAPIARVTGWDAPFPHVFEPFYLPDKWRCYQALIQLIN 435
           P++SGFGAE+A+TVQ+ CFL+LE+PI RV G+D PFPHV EPFYLP   R + A+ + +N
Sbjct: 306 PISSGFGAEIASTVQKRCFLNLESPIDRVAGFDTPFPHVHEPFYLPTVHRVFDAIKKSVN 365

Query: 436 Y 438
           Y
Sbjct: 366 Y 366



 Score = 70.9 bits (166), Expect = 5e-13
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = +3

Query: 3   AAEEVPVEDYTLPLGKAQTLRVGAAATLVGWGTQVHVLLEVADMARDKLGVTV 161
           A+E+VP  DYT+PLG+A+T+R G   TLV WGTQVHV LE A +A++KL   V
Sbjct: 221 ASEDVPTGDYTIPLGQAETVRSGKDLTLVAWGTQVHVALEAAQLAKEKLNADV 273



 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 20/32 (62%), Positives = 27/32 (84%)
 Frame = +2

Query: 161 DVIDLQSILPWDEETVCNSVKKTGRCLISHEA 256
           +VIDLQ+I PWDE+ V  SV+KTGR +++HEA
Sbjct: 274 EVIDLQTIQPWDEDHVVESVQKTGRLIVTHEA 305


>AF038606-5|AAB92024.2|  352|Caenorhabditis elegans Hypothetical
           protein C04C3.3 protein.
          Length = 352

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
 Frame = +1

Query: 265 SGFGAELAATVQE-ECFLHLEAPIARVTGWDAPFPH--VFEPFYLPDKWRCYQALIQLIN 435
           +G G+E+AA V E + F  L+AP+ RVTG D P P+    E   LP      +A+ + +N
Sbjct: 291 AGIGSEIAAQVMESDVFDQLDAPLLRVTGVDVPMPYTQTLEAAALPTAEHVVKAVKKSLN 350


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 186 CPGTRRPCAIP 218
           CPGTRRPC +P
Sbjct: 766 CPGTRRPCDLP 776


>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
            protein Y43F8B.3b protein.
          Length = 1398

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 147  LGVTVTSSICSRSCPGTRRPCAIP 218
            +G T  +++C   CPG   PC++P
Sbjct: 991  IGATPETTVC---CPGATNPCSVP 1011


>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
            protein Y43F8B.3a protein.
          Length = 1816

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 147  LGVTVTSSICSRSCPGTRRPCAIP 218
            +G T  +++C   CPG   PC++P
Sbjct: 1409 IGATPETTVC---CPGATNPCSVP 1429


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,407,119
Number of Sequences: 27780
Number of extensions: 195702
Number of successful extensions: 625
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)