Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0823
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   0.87 
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   2.0  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     25   2.7  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   4.6  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   4.6  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   4.6  
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        23   8.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.1  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   8.1  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 26.2 bits (55), Expect = 0.87
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 269 SQATRSKERPSRRDPPSLRAWHP 201
           SQ  RS++R  RRDPP  R   P
Sbjct: 219 SQRNRSQQRSPRRDPPINRQHTP 241


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 213 GLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 106
           G  P      ++ R W GV+   KR  P   S ++D
Sbjct: 406 GKKPPNNPLEKTNRLWGGVINDIKRRYPMYKSDIMD 441


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 237 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 130
           +P  S++ G++      P +   WTG V  RK+  P
Sbjct: 241 NPGSSLSVGVSGVGSCTPSNPLEWTGNVTVRKKRKP 276


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -3

Query: 228 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 106
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -3

Query: 228 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 106
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -3

Query: 228 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 106
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 81  PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 119


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 185 GRFPVEGARPVATEGRGERDAP 250
           GRFP     P+A EG  + + P
Sbjct: 146 GRFPATPKTPIADEGGDDANDP 167


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 25  EEKKLTRISLVAASEQ 72
           EE+K TR++L AA EQ
Sbjct: 873 EERKRTRVALSAALEQ 888


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = -3

Query: 273 ALSSNPI*GASLSPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTS 118
           +LSSN I G S   R      LAP+  +  RS+   T VV+T   +  +TTS
Sbjct: 512 SLSSNTIAG-STGER---FQDLAPAASESVRSQSNNTTVVSTPSSSSSSTTS 559


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,040
Number of Sequences: 2352
Number of extensions: 11307
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)