Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0823
(635 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029926-1|ABM92800.1| 563|Drosophila melanogaster IP06983p pro... 31 1.7
AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p pro... 31 1.7
AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding ... 31 1.7
AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-P... 31 1.7
AY094891-1|AAM11244.1| 336|Drosophila melanogaster RE61595p pro... 29 4.0
AY060907-1|AAL28455.1| 336|Drosophila melanogaster GM05421p pro... 29 4.0
AE014298-1787|AAF48180.2| 336|Drosophila melanogaster CG1463-PA... 29 4.0
AE014297-1345|AAN13522.1| 150|Drosophila melanogaster CG31389-P... 29 7.0
L07551-1|AAA28464.1| 808|Drosophila melanogaster protein ( Dros... 28 9.2
L07550-1|AAA28463.1| 701|Drosophila melanogaster protein ( Dros... 28 9.2
L07549-1|AAA28462.1| 808|Drosophila melanogaster protein ( Dros... 28 9.2
AY069676-1|AAL39821.1| 808|Drosophila melanogaster LD45021p pro... 28 9.2
AE014134-3374|AAN11109.1| 701|Drosophila melanogaster CG8676-PC... 28 9.2
AE014134-3373|AAN11108.1| 808|Drosophila melanogaster CG8676-PD... 28 9.2
AE014134-3372|AAF53984.1| 808|Drosophila melanogaster CG8676-PB... 28 9.2
AE014134-3371|AAN11107.1| 808|Drosophila melanogaster CG8676-PA... 28 9.2
>BT029926-1|ABM92800.1| 563|Drosophila melanogaster IP06983p
protein.
Length = 563
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 460 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 356
A +T+NL + FEF PE FH SLF+ LF
Sbjct: 378 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 409
>AY069650-1|AAL39795.1| 1075|Drosophila melanogaster LD41918p
protein.
Length = 1075
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 460 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 356
A +T+NL + FEF PE FH SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615
>AF245515-1|AAF73426.1| 1075|Drosophila melanogaster Ran binding
protein 11 protein.
Length = 1075
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 460 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 356
A +T+NL + FEF PE FH SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615
>AE013599-2096|AAF58114.2| 1075|Drosophila melanogaster CG33139-PA
protein.
Length = 1075
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 460 AREKTMNLSVRSFEFRRFTPERFHVLLNSLFKVLF 356
A +T+NL + FEF PE FH SLF+ LF
Sbjct: 584 AAARTLNLLIDDFEFM---PEAFHPYFPSLFEALF 615
>AY094891-1|AAM11244.1| 336|Drosophila melanogaster RE61595p
protein.
Length = 336
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 526 PCRRRTTHETNVPSTSERT*TYAREKTMNLSVRSFEFRR 410
PC+R T + N+P T R A+++ +NL ++ F R
Sbjct: 92 PCKRFTHDQRNLPVTQHRMRMAAKKRNINLRLQLENFSR 130
>AY060907-1|AAL28455.1| 336|Drosophila melanogaster GM05421p
protein.
Length = 336
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 526 PCRRRTTHETNVPSTSERT*TYAREKTMNLSVRSFEFRR 410
PC+R T + N+P T R A+++ +NL ++ F R
Sbjct: 92 PCKRFTHDQRNLPVTQHRMRMAAKKRNINLRLQLENFSR 130
>AE014298-1787|AAF48180.2| 336|Drosophila melanogaster CG1463-PA
protein.
Length = 336
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -2
Query: 526 PCRRRTTHETNVPSTSERT*TYAREKTMNLSVRSFEFRR 410
PC+R T + N+P T R A+++ +NL ++ F R
Sbjct: 92 PCKRFTHDQRNLPVTQHRMRMAAKKRNINLRLQLENFSR 130
>AE014297-1345|AAN13522.1| 150|Drosophila melanogaster CG31389-PA
protein.
Length = 150
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 603 KSTTNGSRCITKREVHVFSGR*TFTYRADGERRTKRTFRQH 481
K+ NG+R + V VF+G F YR G+ + +R H
Sbjct: 6 KNGMNGTRGAHEWRVMVFAGAQKFAYRMQGDEQQQRQQENH 46
>L07551-1|AAA28464.1| 808|Drosophila melanogaster protein (
Drosophila melanogastermRNA sequence, complete cds. ).
Length = 808
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 272 HSQATRSKERPSRRDPPSLRAWHPLRENGPV 180
H AT+ K P++ DP +L+ PL +N P+
Sbjct: 195 HHAATKLKVAPTQSDPINLKFEPPLGDNSPL 225
>L07550-1|AAA28463.1| 701|Drosophila melanogaster protein (
Drosophila melanogastermRNA sequence, complete cds. ).
Length = 701
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 272 HSQATRSKERPSRRDPPSLRAWHPLRENGPV 180
H AT+ K P++ DP +L+ PL +N P+
Sbjct: 195 HHAATKLKVAPTQSDPINLKFEPPLGDNSPL 225
>L07549-1|AAA28462.1| 808|Drosophila melanogaster protein (
Drosophila melanogastermRNA sequence, complete cds. ).
Length = 808
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 272 HSQATRSKERPSRRDPPSLRAWHPLRENGPV 180
H AT+ K P++ DP +L+ PL +N P+
Sbjct: 195 HHAATKLKVAPTQSDPINLKFEPPLGDNSPL 225
>AY069676-1|AAL39821.1| 808|Drosophila melanogaster LD45021p
protein.
Length = 808
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 272 HSQATRSKERPSRRDPPSLRAWHPLRENGPV 180
H AT+ K P++ DP +L+ PL +N P+
Sbjct: 195 HHAATKLKVAPTQSDPINLKFEPPLGDNSPL 225
>AE014134-3374|AAN11109.1| 701|Drosophila melanogaster CG8676-PC,
isoform C protein.
Length = 701
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 272 HSQATRSKERPSRRDPPSLRAWHPLRENGPV 180
H AT+ K P++ DP +L+ PL +N P+
Sbjct: 195 HHAATKLKVAPTQSDPINLKFEPPLGDNSPL 225
>AE014134-3373|AAN11108.1| 808|Drosophila melanogaster CG8676-PD,
isoform D protein.
Length = 808
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 272 HSQATRSKERPSRRDPPSLRAWHPLRENGPV 180
H AT+ K P++ DP +L+ PL +N P+
Sbjct: 195 HHAATKLKVAPTQSDPINLKFEPPLGDNSPL 225
>AE014134-3372|AAF53984.1| 808|Drosophila melanogaster CG8676-PB,
isoform B protein.
Length = 808
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 272 HSQATRSKERPSRRDPPSLRAWHPLRENGPV 180
H AT+ K P++ DP +L+ PL +N P+
Sbjct: 195 HHAATKLKVAPTQSDPINLKFEPPLGDNSPL 225
>AE014134-3371|AAN11107.1| 808|Drosophila melanogaster CG8676-PA,
isoform A protein.
Length = 808
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 272 HSQATRSKERPSRRDPPSLRAWHPLRENGPV 180
H AT+ K P++ DP +L+ PL +N P+
Sbjct: 195 HHAATKLKVAPTQSDPINLKFEPPLGDNSPL 225
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,349,763
Number of Sequences: 53049
Number of extensions: 538979
Number of successful extensions: 1551
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -