Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0822
         (547 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0177 + 15140414-15140777,15142067-15142239                       31   0.79 
07_03_1231 + 25047067-25047262,25047876-25048045,25048897-250490...    29   2.4  
01_06_1087 - 34430521-34430899,34432336-34432806,34432926-344331...    28   5.6  
11_01_0489 + 3776563-3776692,3776995-3777073,3777532-3777840,377...    27   7.4  
11_06_0661 - 26009838-26010950,26011302-26011802                       27   9.8  
06_01_0750 + 5624983-5625173,5626229-5626291,5626421-5626967,562...    27   9.8  

>03_03_0177 + 15140414-15140777,15142067-15142239
          Length = 178

 Score = 30.7 bits (66), Expect = 0.79
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = -1

Query: 304 LDGSISLSPLYPVPTIDCTSESLRSSIRVSPDFDLTRHSSPSFGSQHLCSE 152
           +DG+ + SP  P P +DCT+E+L+  +    D+     ++PS  S+  C E
Sbjct: 24  VDGATASSPA-PAPAVDCTAEALK--LADCLDYVTPGKTAPSRPSKLCCGE 71


>07_03_1231 +
           25047067-25047262,25047876-25048045,25048897-25049030,
           25049122-25049369,25049799-25049904,25049992-25050130,
           25050258-25050385,25050472-25050733
          Length = 460

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 516 LLTKLAHLAPSSDLRLHRSSKPEFSPI 436
           +L  L +LAP  DLR+  SSKP F  I
Sbjct: 258 MLETLVNLAPVLDLRIFSSSKPSFIKI 284


>01_06_1087 -
           34430521-34430899,34432336-34432806,34432926-34433112,
           34433470-34433599,34433794-34434125,34434566-34435050,
           34435185-34435752,34436579-34436640,34437569-34437636
          Length = 893

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -1

Query: 433 KFENRLRSFRPQCL*SFALPDETVLKFYIDASYPEGNF-GRNQLLDGSISLSPLY 272
           K E  LRSF       + LP     K+ I A++  GN+ GRN    GS  L  L+
Sbjct: 93  KQEETLRSFPDGQRNCYTLPTNRSKKYLIRATFTYGNYDGRNSSESGSPFLFGLH 147


>11_01_0489 +
           3776563-3776692,3776995-3777073,3777532-3777840,
           3778828-3778898,3778975-3779213,3779306-3779383,
           3779734-3780156,3780416-3780661,3780886-3780978,
           3781480-3781527
          Length = 571

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 258 IVGTGYRGERLIEPSSSWFRPKFPSG 335
           + GTG      + PSS+WF P+  SG
Sbjct: 14  VFGTGPLPPASLSPSSAWFDPELSSG 39


>11_06_0661 - 26009838-26010950,26011302-26011802
          Length = 537

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 186 HHLSGPSICAQSAPSFTDWK 127
           HHL GP+  + S+P    WK
Sbjct: 297 HHLHGPTSSSSSSPVMASWK 316


>06_01_0750 +
           5624983-5625173,5626229-5626291,5626421-5626967,
           5627075-5627226,5627317-5627533
          Length = 389

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 237 YGPPSGFPLTST*PGIV-HHLSGPSICAQSAPSFTDW 130
           +GP   FP +S+  G   HH+ G +  A +A S + W
Sbjct: 156 HGPVVQFPWSSSASGSAGHHVDGAAAAAATASSASSW 192


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,957,927
Number of Sequences: 37544
Number of extensions: 321300
Number of successful extensions: 678
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)