Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0822
         (547 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane trans...    44   3e-04
BC039340-1|AAH39340.1|  731|Homo sapiens ARHGAP20 protein protein.     29   8.0  
AY496267-1|AAS45470.1| 1165|Homo sapiens RhoGTPase regulating pr...    29   8.0  
AY496266-1|AAS45469.1| 1168|Homo sapiens RhoGTPase regulating pr...    29   8.0  
AY496265-1|AAS45468.1| 1155|Homo sapiens RhoGTPase regulating pr...    29   8.0  
AY496264-1|AAS45467.1| 1155|Homo sapiens RhoGTPase regulating pr...    29   8.0  
AY496263-1|AAS45466.1| 1191|Homo sapiens RhoGTPase regulating pr...    29   8.0  
AB037812-1|BAA92629.1| 1194|Homo sapiens KIAA1391 protein protein.     29   8.0  

>AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane
           transporter protein protein.
          Length = 283

 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +1

Query: 181 MVNYAWSGRSQGKP*WRTVAILTC 252
           MVNYAW+GRSQ K  WR+VA+LTC
Sbjct: 1   MVNYAWAGRSQRKLWWRSVAVLTC 24


>BC039340-1|AAH39340.1|  731|Homo sapiens ARHGAP20 protein protein.
          Length = 731

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 313 NQLLDGSISLSPLYPVPTIDCTSESLRSSIRVSPDFDLTRHSS--PSFGSQHLCSERAF 143
           +Q+ + S+  +P      IDCT ++ R    +SPDF    H S  P   S   CS  A+
Sbjct: 501 SQISEHSV-FTPTETSSPIDCTFQAQRKREDLSPDFSNASHVSGMPGPSSGQACSRPAY 558


>AY496267-1|AAS45470.1| 1165|Homo sapiens RhoGTPase regulating protein
            variant ARHGAP20-1be protein.
          Length = 1165

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 313  NQLLDGSISLSPLYPVPTIDCTSESLRSSIRVSPDFDLTRHSS--PSFGSQHLCSERAF 143
            +Q+ + S+  +P      IDCT ++ R    +SPDF    H S  P   S   CS  A+
Sbjct: 932  SQISEHSV-FTPTETSSPIDCTFQAQRKREDLSPDFSNASHVSGMPGPSSGQACSRPAY 989


>AY496266-1|AAS45469.1| 1168|Homo sapiens RhoGTPase regulating protein
            variant ARHGAP20-1c protein.
          Length = 1168

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 313  NQLLDGSISLSPLYPVPTIDCTSESLRSSIRVSPDFDLTRHSS--PSFGSQHLCSERAF 143
            +Q+ + S+  +P      IDCT ++ R    +SPDF    H S  P   S   CS  A+
Sbjct: 935  SQISEHSV-FTPTETSSPIDCTFQAQRKREDLSPDFSNASHVSGMPGPSSGQACSRPAY 992


>AY496265-1|AAS45468.1| 1155|Homo sapiens RhoGTPase regulating protein
            variant ARHGAP20-1e protein.
          Length = 1155

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 313  NQLLDGSISLSPLYPVPTIDCTSESLRSSIRVSPDFDLTRHSS--PSFGSQHLCSERAF 143
            +Q+ + S+  +P      IDCT ++ R    +SPDF    H S  P   S   CS  A+
Sbjct: 922  SQISEHSV-FTPTETSSPIDCTFQAQRKREDLSPDFSNASHVSGMPGPSSGQACSRPAY 979


>AY496264-1|AAS45467.1| 1155|Homo sapiens RhoGTPase regulating protein
            variant ARHGAP20-1d protein.
          Length = 1155

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 313  NQLLDGSISLSPLYPVPTIDCTSESLRSSIRVSPDFDLTRHSS--PSFGSQHLCSERAF 143
            +Q+ + S+  +P      IDCT ++ R    +SPDF    H S  P   S   CS  A+
Sbjct: 922  SQISEHSV-FTPTETSSPIDCTFQAQRKREDLSPDFSNASHVSGMPGPSSGQACSRPAY 979


>AY496263-1|AAS45466.1| 1191|Homo sapiens RhoGTPase regulating protein
            variant ARHGAP20-1ad protein.
          Length = 1191

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 313  NQLLDGSISLSPLYPVPTIDCTSESLRSSIRVSPDFDLTRHSS--PSFGSQHLCSERAF 143
            +Q+ + S+  +P      IDCT ++ R    +SPDF    H S  P   S   CS  A+
Sbjct: 958  SQISEHSV-FTPTETSSPIDCTFQAQRKREDLSPDFSNASHVSGMPGPSSGQACSRPAY 1015


>AB037812-1|BAA92629.1| 1194|Homo sapiens KIAA1391 protein protein.
          Length = 1194

 Score = 29.5 bits (63), Expect = 8.0
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 313  NQLLDGSISLSPLYPVPTIDCTSESLRSSIRVSPDFDLTRHSS--PSFGSQHLCSERAF 143
            +Q+ + S+  +P      IDCT ++ R    +SPDF    H S  P   S   CS  A+
Sbjct: 961  SQISEHSV-FTPTETSSPIDCTFQAQRKREDLSPDFSNASHVSGMPGPSSGQACSRPAY 1018


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,368,803
Number of Sequences: 237096
Number of extensions: 1686548
Number of successful extensions: 6839
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6839
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)