Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0818
(603 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13) 44 1e-04
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 41 9e-04
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) 41 9e-04
SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 39 0.003
SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18) 38 0.005
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 38 0.005
SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10) 38 0.005
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 38 0.006
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 38 0.006
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09) 37 0.011
SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11) 37 0.011
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 37 0.014
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 36 0.019
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 36 0.025
SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07) 36 0.033
SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12) 36 0.033
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12) 36 0.033
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 35 0.058
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 35 0.058
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.077
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.077
SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013) 34 0.077
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 34 0.10
SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022) 34 0.10
SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04) 34 0.10
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 34 0.10
SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29) 33 0.13
SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09) 33 0.13
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 33 0.18
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 33 0.18
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 33 0.18
SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45) 33 0.24
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 32 0.31
SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078) 32 0.41
SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07) 31 0.54
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 31 0.54
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_10732| Best HMM Match : Collagen (HMM E-Value=0.029) 31 0.54
SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11) 31 0.72
SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06) 31 0.72
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_48755| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08) 31 0.95
SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12) 31 0.95
SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22) 31 0.95
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 30 1.3
SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05) 30 1.3
SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035) 30 1.3
SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015) 30 1.3
SB_20784| Best HMM Match : Collagen (HMM E-Value=0.0036) 30 1.3
SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_30187| Best HMM Match : ShlB (HMM E-Value=8.7) 30 1.7
SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 29 2.2
SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024) 29 2.2
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_58047| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_55034| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031) 28 5.1
SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031) 28 5.1
SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01) 28 5.1
SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07) 28 5.1
SB_41255| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048) 28 5.1
SB_14932| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 28 6.7
SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11) 28 6.7
SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 27 8.8
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 27 8.8
SB_55338| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
TG KG +G TG +G+ GR G++G PG GR G P
Sbjct: 207 TGPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTP 243
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + + G+T +G G+TG +G G+ G G+PG GRPG
Sbjct: 208 GPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTPGKNGRPG 250
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+K + G+T +G +G G +G G G++GS G QGRPG
Sbjct: 295 GSKGKTGARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPG 337
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G KGKTGA+G G G++G G QG G+
Sbjct: 295 GSKGKTGARGATGPRGLRGLRGPQGNQGL 323
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GAK + G G KG GA+G G G G PG G PG P
Sbjct: 250 GAKGAMGPRGYRGLTGSKGARGARGKQGLRGATGRPGRNGVPGRP 294
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
TGS ++G +GK G +G GR G G PG G G
Sbjct: 264 TGSKGARGARGKQGLRGATGRPGRNGVPGRPGSKG 298
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K S G +G KG TG++G+ G G +G G QG+ G
Sbjct: 145 GLKGSRGFMGPRGLRGLKGTTGSRGYRGLKGSRGLTGPQGKTG 187
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GAK +TG +G +G TG +G G G G G G+PG+
Sbjct: 367 GAKGVRGATGLRGPQGPRGFTGKQGLRGVPGRTGKTGANGKPGL 410
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA+ + G +G +G G +G G G+QG PG G G
Sbjct: 301 GARGATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGAKG 343
Score = 34.3 bits (75), Expect = 0.077
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + + G +G G GA+G G+ G++G+ G GR G+P
Sbjct: 247 GRPGAKGAMGPRGYRGLTGSKGARGARGKQGLRGATGRPGRNGVP 291
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA G T SKG +G G +G G G G G GRPG
Sbjct: 253 GAMGPRGYRGLTGSKGARGARGKQGLRGATGRPGRNGVPGRPG 295
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
TG+ +G GKTG KG G G QG G +G G
Sbjct: 462 TGARGLQGKTGKTGQKGAKGARGTQGVRGPRGYRG 496
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G RGF G PG GPRGL G
Sbjct: 195 RGYRGFTGKPGLTGPRGLKG 214
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + +TG +G +G TGA+G G+ G G G +G G
Sbjct: 442 GPRGKTGATGPQGLRGYRGYTGARGLQGKTGKTGQKGAKGARG 484
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G N G SKG G GA G G G++G G+QG G+
Sbjct: 283 GRPGRNGVPGRPGSKGKTGARGATGPRGLRGLRGPQGNQGLRGL 326
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+T S+G +G G++G G G G+ G QG G
Sbjct: 163 GTTGSRGYRGLKGSRGLTGPQGKTGARGPQGLRG 196
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GAK N + G T G +GK G +GF G G +G G G G
Sbjct: 340 GAKGRNGAPGRT---GARGKIGPRGFTGLKGAKGVRGATGLRG 379
Score = 31.5 bits (68), Expect = 0.54
Identities = 19/43 (44%), Positives = 21/43 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA G KG KGKTGA G G G++GS G G G
Sbjct: 403 GANGKPGLRGPQGLKGLKGKTGATGPRGLRGLKGSRGWTGPRG 445
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQ---GRPGI 600
G K + S G KG +G TG +G G G QG G + G+PG+
Sbjct: 160 GLKGTTGSRGYRGLKGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGL 206
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 463 T*GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
T G++ GS G +GKTGA+G G G +G G G G
Sbjct: 164 TTGSRGYRGLKGSRGLTGPQGKTGARGPQGLRGYRGFTGKPGLTG 208
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG RG G GPQGPRG G
Sbjct: 369 KGVRGATGLRGPQGPRGFTG 388
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG RG G GP GPRGL G
Sbjct: 129 KGIRGLRGLKGPIGPRGLKG 148
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GA+ G+T G G G G G+ G +G+ G +G G+
Sbjct: 271 GARGKQGLRGATGRPGRNGVPGRPGSKGKTGARGATGPRGLRGL 314
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GS G +GKTGA G G G +G G +G G
Sbjct: 436 GSRGWTGPRGKTGATGPQGLRGYRGYTGARGLQG 469
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GA G +G++G G KG G G G G +GR G P
Sbjct: 304 GATGPRGLRGLRGPQGNQGLRGLKGSRGVQGRPGKNGAKGRNGAP 348
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
++G RG+ G+ GP+G RGL G
Sbjct: 116 KQGPRGWTGARGPKGIRGLRG 136
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
VP + G G PG GPQG +GL G
Sbjct: 395 VPGRTGKTGANGKPGLRGPQGLKGLKG 421
>SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13)
Length = 456
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +N + G+ KGDKG TGA G G G++G GDQG G
Sbjct: 301 GDTGANGTAGAPGVKGDKGDTGASGAKGEAGVKGDKGDQGVMG 343
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KGDKG TGA G AG G++G GD G G
Sbjct: 292 GDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASG 325
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +1
Query: 463 T*GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
T GA G T + G KG+ G KG G G+ G+ GDQG G
Sbjct: 308 TAGAPGVKGDKGDTGASGAKGEAGVKGDKGDQGVMGAKGDQGIQG 352
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K TG++ +KG+ G G KG G MG +G G QG G
Sbjct: 313 GVKGDKGDTGASGAKGEAGVKGDKGDQGVMGAKGDQGIQGFNG 355
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G ++ + G KGDKG G G G GIQG G +G G+
Sbjct: 319 GDTGASGAKGEAGVKGDKGDQGVMGAKGDQGIQGFNGTKGEKGV 362
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+ K +G RGF GS GP GP+GL G
Sbjct: 266 IAKMEGPQGPRGFNGSEGPVGPKGLKG 292
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G S G KGD G G KG G G G+PG +G G
Sbjct: 277 GFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKG 319
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GA + + G+ GD G+ G +G GR G+QG G +G PG P
Sbjct: 61 GAAGEDGAEGAAGLVGDSGEKGYRGAPGRQGLQGKRGPEGDPGSP 105
Score = 34.3 bits (75), Expect = 0.077
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ + G G G G +GF G G G GD GRPG
Sbjct: 103 GSPGGSGEAGDKGVDGPPGSPGPQGFNGARGPNGPKGDSGRPG 145
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ G KG +G G GR G G PG +G PG
Sbjct: 130 GARGPNGPKGDSGRPGQDGRQGPPGPPGARGEPG 163
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
TG+ GD+G++G KG AG G +G+ G G G
Sbjct: 45 TGAQGPIGDRGRSGPKGAAGEDGAEGAAGLVGDSG 79
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA G +GD G G G AG G+ G PG G G
Sbjct: 85 GAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGVDGPPGSPGPQG 127
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G S G +G GA+G G G G PG GR G P
Sbjct: 118 GPPGSPGPQGFNGARGPNGPKGDSGRPGQDGRQGPP 153
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
+GD G+ G G G +G QG+ G G PG
Sbjct: 6 QGDPGEPGRDGTPGAIGPQGNKGYAGNPG 34
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1
Query: 490 STGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
S G G +G G KG +GR G G G G PG
Sbjct: 122 SPGPQGFNGARGPNGPKGDSGRPGQDGRQGPPGPPG 157
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+KG G PGSPGPQG G G
Sbjct: 113 DKGVDGPPGSPGPQGFNGARG 133
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG+ G PG G QGP G PG
Sbjct: 138 KGDSGRPGQDGRQGPPGPPG 157
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P +GN+G+ G+PG G GL G
Sbjct: 18 PGAIGPQGNKGYAGNPGTLGLEGLRG 43
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
EKG RG PG G QG RG G
Sbjct: 80 EKGYRGAPGRQGLQGKRGPEG 100
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ +G +GK G +G G G G GD+G G P
Sbjct: 85 GAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGVDGPP 120
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPGH 439
E G G PG+ GPQG +G G+
Sbjct: 11 EPGRDGTPGAIGPQGNKGYAGN 32
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + G G G KG+AG G G G +GR G
Sbjct: 13 GRDGTPGAIGPQGNKGYAGNPGTLGLEGLRGRTG 46
>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
Length = 863
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 475 KRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
++ N+S G+ KGD+G G G G G QG G QG PG+
Sbjct: 478 RQENKSHGAAGPKGDRGPAGPPGPRGLPGAQGPQGIQGTPGV 519
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G RG PG+ GPQG +G PG
Sbjct: 500 GPRGLPGAQGPQGIQGTPG 518
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 362 KCFAEKGNRGFPGSPGPQGPRGLPG 436
K G +G G GP GPRGLPG
Sbjct: 482 KSHGAAGPKGDRGPAGPPGPRGLPG 506
>SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KGDKG TGA G AG G++G GD G G
Sbjct: 702 GDPGLKGDKGDTGANGTAGAPGVKGDKGDTGASG 735
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+ K +G RGF GS GP GP+GL G
Sbjct: 676 IAKMEGPQGPRGFNGSEGPVGPKGLKG 702
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G S G KGD G G KG G G G+PG +G G
Sbjct: 687 GFNGSEGPVGPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKG 729
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAG 552
G +N + G+ KGDKG TGA G G
Sbjct: 711 GDTGANGTAGAPGVKGDKGDTGASGAKG 738
>SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
+G S GD G GA G G G +G PGD+G G+P
Sbjct: 127 SGKAGSIGDPGPNGASGMPGFDGTKGDPGDEGNEGLP 163
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GA + G KGD G G GF G G G GD G+PGI
Sbjct: 74 GALGAKGQKGRMGLKGDAGYDGVDGFKGLPGPPGFQGDPGKPGI 117
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
TG+ +KG KG+ G KG AG G+ G G G PG
Sbjct: 73 TGALGAKGQKGRMGLKGDAGYDGVDGFKGLPGPPG 107
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPGH 439
KG G PG GP GP G PGH
Sbjct: 43 KGKSGLPGDKGPVGPPGHPGH 63
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G T G G GAKG GRMG++G G G G
Sbjct: 65 GPTGESGPTGALGAKGQKGRMGLKGDAGYDGVDG 98
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K G +G KGK+G G G +G G PG +G G
Sbjct: 26 GVKGKEGRDGVKGERGSKGKSGLPGDKGPVGPPGHPGHKGPTG 68
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPGH 439
E+G++G G PG +GP G PGH
Sbjct: 39 ERGSKGKSGLPGDKGPVGPPGH 60
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G +G G +G +G+ G G PG G G+P
Sbjct: 110 GDPGKPGIRGHEGLQGVSGKAGSIGDPGPNGASGMP 145
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GAK G G G G KG G G QG PG G G
Sbjct: 77 GAKGQKGRMGLKGDAGYDGVDGFKGLPGPPGFQGDPGKPGIRG 119
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G S+G G G +G G G G G +GR G+
Sbjct: 2 GLMGSRGTPGDRGPRGPPGEQGFSGVKGKEGRDGV 36
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G+RG PG GP+GP G G
Sbjct: 5 GSRGTPGDRGPRGPPGEQG 23
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G G+PG +GPRG PG
Sbjct: 2 GLMGSRGTPGDRGPRGPPG 20
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
KGD G G +G AGR GI G PG +G PG
Sbjct: 1105 KGDPGPAGPRGPAGRNGIDGLPGTKGEPG 1133
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G K + G GD GK G +GF G G G PG+ G PG P
Sbjct: 531 GTKGNQGIAGPPGQIGDPGKMGPQGFKGDPGPPGPPGEVGVPGAP 575
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+T +KGD+G G G +G G +G G G PG+P
Sbjct: 1283 GNTGAKGDRGIPGLNGLSGIPGERGPVGPAGPPGLP 1318
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G+KG+ G G G GI+G G++G PG
Sbjct: 369 GEPGKQGEKGEEGRPGLPGAQGIEGPKGERGEPG 402
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + G+T KG G G KG G+ QG G++GRPG+P
Sbjct: 345 GGSGGSGCNGTTIFKGPPGAPGEKGEPGK---QGEKGEEGRPGLP 386
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA S G + G G G G AG+ G+ G+PG +G PG
Sbjct: 691 GAIGSRGLPGPSGEPGKPGPAGRAGLAGQDGLPGTPGTKGEPG 733
Score = 35.9 bits (79), Expect = 0.025
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
TG KGD G +G G AG G G+PG QG G P
Sbjct: 854 TGEQGVKGDTGPSGEPGPAGPPGPLGTPGTQGAKGEP 890
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 490 STGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
S G + +GDKG G G +G G +G+ G G PGIP
Sbjct: 1413 SPGLSGLRGDKGDRGLPGPSGPPGEEGARGSDGFPGIP 1450
Score = 35.5 bits (78), Expect = 0.033
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GA + G KG+ G G KG AG +GI G PG G PG+
Sbjct: 811 GAPGRDGIDGVRGPKGEPGSDGMKGEAG-VGIDGPPGPPGPPGV 853
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + + G G G+ G G GR G++G PG +GR G+P
Sbjct: 879 GTPGTQGAKGEPGPLGTPGRQGLAGPPGRDGMKGDPGPRGRDGLP 923
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G KG+ G GF G GIQG G +G PG P
Sbjct: 1222 GPKGERGVNGFPGIKGIQGVQGLEGPPGPP 1251
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GS KGD G G +G G G+ G+ G +G PG
Sbjct: 1133 GSLGEKGDAGIPGQRGLTGNPGLPGAQGLKGEPG 1166
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G K + G G G+ G +G G G +G G+ GRPG+P
Sbjct: 1479 GEKGDSGFPGINGPPGPPGQRGYEGARGPPGAKGQAGEDGRPGVP 1523
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G T + G G G KG GR G GSPG +G PG
Sbjct: 1148 GLTGNPGLPGAQGLKGEPGRDGQNGSPGRKGEPG 1181
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGI-QGSPGDQGRPG 597
GA+ S+ G SKG++G G KG G G +G PG +G G
Sbjct: 1439 GARGSDGFPGIPGSKGERGLIGPKGIKGERGYGKGIPGPRGEKG 1482
Score = 34.3 bits (75), Expect = 0.077
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G K G G+KG G G G G +G GDQG PG+
Sbjct: 1325 GPKGETGLPGMPGLDGEKGSAGVPGIPGGPGGRGFKGDQGPPGL 1368
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G+TG KG G G G+PG G PG
Sbjct: 1040 GPRGETGEKGLDGPSGPPGTPGQPGPPG 1067
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G KG++G G G G G+QG G G PG P
Sbjct: 1219 GPAGPKGERGVNGFPGIKGIQGVQGLEGPPGPPGPP 1254
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 487 RSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
R G +KG +G G G G G G PG+QG G+P
Sbjct: 743 RIKGEKGAKGQQGGIGNPGPPGLRGDVGPPGEQGPTGVP 781
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPGH 439
+P EKG+ GFPG GP GP G G+
Sbjct: 1474 IPGPRGEKGDSGFPGINGPPGPPGQRGY 1501
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K G +G G GA+G G G +G PG+QG G
Sbjct: 366 GEKGEPGKQGEKGEEGRPGLPGAQGIEGPKGERGEPGNQGLKG 408
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P + G+RG PG GP+GP G+ G
Sbjct: 926 PGARGDIGSRGLPGEDGPRGPPGIQG 951
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G N G +KG+ G G KG AG G +G G+ G PG
Sbjct: 1115 GPAGRNGIDGLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPG 1157
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGA-KGFAGRMGIQGSPGDQGRPGI 600
TG+ SKGD+G+ +G G G G+ GD+G PG+
Sbjct: 1260 TGAKGSKGDQGELVIERGAPGPRGNTGAKGDRGIPGL 1296
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K G G+KG G G G G +G PG G PG
Sbjct: 1394 GPKGEPGLPGRDGPAGEKGSPGLSGLRGDKGDRGLPGPSGPPG 1436
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G T KG G +G G G+ G G G +GR G P
Sbjct: 1043 GETGEKGLDGPSGPPGTPGQPGPPGPRGPEGRQGFP 1078
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G KG+ G+ G G GI G G G PG+P
Sbjct: 1127 GTKGEPGSLGEKGDAGIPGQRGLTGNPGLP 1156
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ G G G G +G +G PG G PG P
Sbjct: 679 GEPGSPGLPGEDGAIGSRGLPGPSGEPGKP 708
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + + GS G G+ G G AGR G+ G G G PG
Sbjct: 685 GLPGEDGAIGSRGLPGPSGEPGKPGPAGRAGLAGQDGLPGTPG 727
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
TG + G G G G G G +G PG G PG
Sbjct: 863 TGPSGEPGPAGPPGPLGTPGTQGAKGEPGPLGTPG 897
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G K G S G KG+ G G G G+ G PG G G+
Sbjct: 1160 GLKGEPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGPAGV 1203
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G K G + G G G G G GI G G +G PG+P
Sbjct: 1358 GFKGDQGPPGLNGNPGAPGVDGPTGPKGESGIAGLDGPKGEPGLP 1402
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 323 INRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+N N APG P KG G G GP+G GLPG
Sbjct: 1368 LNGNPGAPGVDGPT--GPKGESGIAGLDGPKGEPGLPG 1403
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 344 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
PG PK E+G GFPG G QG +GL G
Sbjct: 1218 PGPAGPK--GERGVNGFPGIKGIQGVQGLEG 1246
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G S G G G G G G QG PG G PG P
Sbjct: 1340 GEKGSAGVPGIPGGPGGRGFKGDQGPPGLNGNPGAP 1375
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G+ GFPG PG +G RGL G
Sbjct: 1441 RGSDGFPGIPGSKGERGLIG 1460
Score = 30.3 bits (65), Expect(2) = 0.017
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQG 588
KG++G+ G +G G G+ G+PG G
Sbjct: 395 KGERGEPGNQGLKGDRGVDGNPGPIG 420
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 478 RSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
R N + +K K G G +GR GI G PG QG G
Sbjct: 441 RDNLRWETQVTKVTKAPPGEPGASGRPGIPGRPGTQGAKG 480
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 6/37 (16%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQG------RPGIP 603
KG++G+ G G G GI G GD G RPG+P
Sbjct: 979 KGERGRDGLDGQNGLPGIPGPKGDTGPVGPPGRPGLP 1015
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G G +G G +GF G G QG G G PG
Sbjct: 1061 GQPGPPGPRGPEGRQGFPGFKGNQGEKGRMGPPG 1094
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPG 579
G+KG TG G G +G+ G PG
Sbjct: 1548 GEKGATGLPGLTGSIGVPGPPG 1569
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG +G PG GPQGP G+ G
Sbjct: 269 KGVKGEPGPEGPQGPPGVRG 288
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G T G+ G G G G G QG+ G+ G G P
Sbjct: 861 GDTGPSGEPGPAGPPGPLGTPGTQGAKGEPGPLGTP 896
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G G+ GA+G G G+ G G +G PGI
Sbjct: 921 GLPGEPGARGDIGSRGLPGEDGPRGPPGI 949
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PGP GPRG G
Sbjct: 1055 GPPGTPGQPGPPGPRGPEG 1073
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P EKG+ G PG G G GLPG
Sbjct: 1132 PGSLGEKGDAGIPGQRGLTGNPGLPG 1157
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+P EKG+ G PG PG G RG G
Sbjct: 1335 MPGLDGEKGSAGVPGIPGGPGGRGFKG 1361
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GS G G G +GF G G G G+ G PG+
Sbjct: 1343 GSAGVPGIPGGPGGRGFKGDQGPPGLNGNPGAPGV 1377
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P +G +G PG PGP G G+PG
Sbjct: 548 PGKMGPQGFKGDPGPPGPPGEVGVPG 573
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G RG G PG QGP G+PG
Sbjct: 764 GLRGDVGPPGEQGPTGVPG 782
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + G+KG G G G G +G G G PG P
Sbjct: 1025 GEDGNIGEKGYAGLPGPRGETGEKGLDGPSGPPGTP 1060
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E G+ G PG G G RGLPG
Sbjct: 680 EPGSPGLPGEDGAIGSRGLPG 700
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PGP+GP G G
Sbjct: 1058 GTPGQPGPPGPRGPEGRQG 1076
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G + + G ++G KG+ G G G G +G PG G+ GI
Sbjct: 1145 GQRGLTGNPGLPGAQGLKGEPGRDGQNGSPGRKGEPGPAGKNGI 1188
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG G PG GP G +G PG
Sbjct: 1396 KGEPGLPGRDGPAGEKGSPG 1415
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+KG+RG PG GP G G G
Sbjct: 1422 DKGDRGLPGPSGPPGEEGARG 1442
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PG +GP G PG
Sbjct: 567 GEVGVPGAPGMKGPIGKPG 585
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G G PGP+G GLPG
Sbjct: 906 GRDGMKGDPGPRGRDGLPG 924
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 514 GDKGKTGAKGFA--GRMGIQGSPGDQGRPGI 600
G +G GAKG A G G G PG GRPG+
Sbjct: 948 GIQGMKGAKGDAITGPTGPPGPPGLPGRPGL 978
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
EKG+ G G G +G RGLPG
Sbjct: 1410 EKGSPGLSGLRGDKGDRGLPG 1430
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 5/27 (18%)
Frame = +2
Query: 374 EKGNRGFPGSP-----GPQGPRGLPGH 439
EKG GFPG P GP G +GL G+
Sbjct: 621 EKGPTGFPGPPGDSDYGPPGDKGLKGN 647
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ S+G G +G G G G G G G PG P
Sbjct: 691 GAIGSRGLPGPSGEPGKPGPAGRAGLAGQDGLPGTP 726
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMG---IQGSPGDQGRPGIP 603
G K + G KG+ G G G AG G + G GD+G G+P
Sbjct: 1382 GPKGESGIAGLDGPKGEPGLPGRDGPAGEKGSPGLSGLRGDKGDRGLP 1429
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
KG+ G G +G G G G PG G G+P
Sbjct: 272 KGEPGPEGPQGPPGVRGDTGFPGLNGTQGLP 302
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPGH 439
KG RG PG+ G +G RG+ G+
Sbjct: 395 KGERGEPGNQGLKGDRGVDGN 415
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
KGD G G G G G G G G+PG
Sbjct: 557 KGDPGPPGPPGEVGVPGAPGMKGPIGKPG 585
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+ G G PG GP GP G PG
Sbjct: 862 DTGPSGEPGPAGPPGPLGTPG 882
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KG+ G G G+ G+ G PG +G G
Sbjct: 977 GLKGERGRDGLDGQNGLPGIPGPKGDTG 1004
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
VP G RGF G GP G G PG
Sbjct: 1347 VPGIPGGPGGRGFKGDQGPPGLNGNPG 1373
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G+ G GF G G G PG +G G
Sbjct: 1476 GPRGEKGDSGFPGINGPPGPPGQRGYEG 1503
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
EKG G PG PG QG G G
Sbjct: 376 EKGEEGRPGLPGAQGIEGPKG 396
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGP 421
KG+RG G+PGP GP
Sbjct: 407 KGDRGVDGNPGPIGP 421
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 344 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
PG P+ F KG+ G PG PG G G PG
Sbjct: 548 PGKMGPQGF--KGDPGPPGPPGEVGVPGAPG 576
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 368 FAEKGNRGFPGSPGPQGPRGLPG 436
+ G++G G+ GP G G+PG
Sbjct: 636 YGPPGDKGLKGNTGPPGDEGVPG 658
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKG---FAGRMGI--QGSPGDQGRPG 597
G G++G TG G +G +G QG PGD G PG
Sbjct: 767 GDVGPPGEQGPTGVPGESWTSGGVGQIKQGPPGDPGNPG 805
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
++G G PG PG QG +G PG
Sbjct: 1146 QRGLTGNPGLPGAQGLKGEPG 1166
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+ G G G PGP GP G+ G
Sbjct: 1185 KNGINGLDGPPGPDGPAGVQG 1205
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG GP GP G PG
Sbjct: 1298 GLSGIPGERGPVGPAGPPG 1316
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KGD G G G G G +G G +G PG
Sbjct: 1476 GPRGEKGDSGFPGINGPPGPPGQRGYEGARGPPG 1509
Score = 25.0 bits (52), Expect(2) = 0.017
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 568 GSPGDQGRPGIP 603
G PG GRPGIP
Sbjct: 459 GEPGASGRPGIP 470
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 475 KRSNR-STGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
KR R S G T +KG +GK G +G + G+ G+ G GRPG+P
Sbjct: 112 KRGKRGSRGRTGAKGSRGKEGKRG---KTGLPGTDGRDGRPGVP 152
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + + G T KGD G TG KG G G GS G G+PG+P
Sbjct: 222 GPQGPKGARGITGPKGDAGITGPKGTPGDPGPTGSRGRPGKPGLP 266
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G++ G T G G+ G G G +G G PG G PGIP
Sbjct: 126 GSRGKEGKRGKTGLPGTDGRDGRPGVPGPIGPIGPPGKIGLPGIP 170
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G++ + GS +G +GKTG G GR G G PG G G P
Sbjct: 117 GSRGRTGAKGSRGKEGKRGKTGLPGTDGRDGRPGVPGPIGPIGPP 161
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQG 588
KGDKG G +G G G GSPG G
Sbjct: 173 KGDKGDPGKQGLTGLTGAPGSPGLPG 198
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G +G PG PGP G RG PG
Sbjct: 243 GPKGTPGDPGPTGSRGRPG 261
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G KG G+ G+ G G G PG+P
Sbjct: 168 GIPGMKGDKGDPGKQGLTGLTGAPGSPGLP 197
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGD 582
G KGD GK G G G G G PG+
Sbjct: 171 GMKGDKGDPGKQGLTGLTGAPGSPGLPGN 199
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PGP GP G PG
Sbjct: 144 GRDGRPGVPGPIGPIGPPG 162
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G S G G+ G+ G +G G G QG+PG QG PG+P
Sbjct: 411 GLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLP 455
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G S+ G T + G +G+ G+KG G G QG PG G PG P
Sbjct: 621 GVMGSSGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSGPPGRP 665
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGS---PGDQGRPGIP 603
TG T GD+G GA G G G QG+ PG GR G+P
Sbjct: 491 TGPTGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMP 530
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G +G G GR G++G+PG G PGIP
Sbjct: 672 GPPGPSGPSGSNGRNGVKGTPGRDGEPGIP 701
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 469 GAKRSNRSTGSTWS---KGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TGS S +G +G +G +G G+ GI G PG+ G PG
Sbjct: 189 GLKGKRGATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPG 234
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + G G+ G KG GR G G PG GRPG
Sbjct: 675 GPSGPSGSNGRNGVKGTPGRDGEPGIPGPDGRPG 708
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+T S+G G G +G +G G +G G GRPG P
Sbjct: 195 GATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEP 230
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G K + GS+ G G G +G G G +G+PG QG PG+
Sbjct: 615 GIKGAKGVMGSSGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGM 658
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GA S + G G G G G G G++G+PG++G G+P
Sbjct: 141 GAPGSPGAEGKVGLTGQTGPRGPTGPPGLQGVRGAPGNEGARGLP 185
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G SKG +G G++G G G G PG G PG P
Sbjct: 639 GRLGSKGGEGTPGSQGMPGMSGPPGRPGPPGPPGPP 674
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 490 STGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
S G +G+ G G G AG +G G PG G PG P
Sbjct: 106 SDGPRGQRGEVGLPGESGSAGMVGRPGRPGFDGAPGAP 143
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFA---GRMGIQGSPGDQGRPGIP 603
GA S S G+ +G G G+KG A GR G G PGD+G G P
Sbjct: 195 GATGSRGSPGNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDKGAMGGP 242
Score = 34.3 bits (75), Expect = 0.077
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + + G G GA G G G GSPG +G PG P
Sbjct: 252 GPSGAPGITGNPGATGINGDRGPNGSPGPRGAPGPP 287
Score = 34.3 bits (75), Expect = 0.077
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA G+ ++GD GK G +G AG G G GD+G G
Sbjct: 828 GANGEPGVQGAKGARGDDGKDGKQGPAGPQGPNGPQGDKGNRG 870
Score = 34.3 bits (75), Expect = 0.077
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GA+ + G G +G G +G G G +G G+QG PG+
Sbjct: 840 GARGDDGKDGKQGPAGPQGPNGPQGDKGNRGPRGEKGEQGPPGV 883
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GD+G +G G G +G G PG+QG G P
Sbjct: 22 GDQGPSGEAGKPGPLGYNGQPGNQGMRGDP 51
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GS G G+ G G G G G PG G+PGI
Sbjct: 216 GSKGQAGIDGRPGEPGLPGDKGAMGGPGPAGQPGI 250
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ ++G G G KG G G +GSPG+QG G
Sbjct: 177 GNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQG 210
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +1
Query: 490 STGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
S G+ + G+ G G K G G QG PG GR G P
Sbjct: 502 SNGADGTPGEPGAQGTKRKPGTPGRQGMPGASGRRGAP 539
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + G +G GAKG G G G PG G+ G P
Sbjct: 528 GMPGASGRRGAPGAKGSRGERGRVGPPGIDGKDGAP 563
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KG+KG +G +G+ G+ G G PG G G
Sbjct: 714 GEIGRKGEKGPSGERGYPGKDGRAGEPGAVGLRG 747
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G G+ G G G GR G G+PG G PG
Sbjct: 114 GEVGLPGESGSAGMVGRPGRPGFDGAPGAPGSPG 147
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GS +G +G+ G G +G G+ G PG G G P
Sbjct: 105 GSDGPRGQRGEVGLPGESGSAGMVGRPGRPGFDGAP 140
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + ++ G+ +G +G+TG G G G G G G G P
Sbjct: 465 GERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNGADGTP 509
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KG+ G+ G GF G+ G QG+ G G G
Sbjct: 576 GPAGEKGEAGQPGTNGFNGKNGDQGASGPTGPVG 609
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 520 KGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
+GK G G GR GI G G++G PG P
Sbjct: 785 QGKPGINGTNGRGGIPGLKGERGSPGEP 812
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQG---SPGDQGRPG 597
GDKG G G AG+ GI+G +PG G PG
Sbjct: 234 GDKGAMGGPGPAGQPGIRGPSGAPGITGNPG 264
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA G G KG G G +GR GI G+ G +GR G
Sbjct: 600 GASGPTGPVGPRGPGGIKGAKGVMGSSGRPGITGTLGQRGRLG 642
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G+RG PG+ GPQGP G G
Sbjct: 198 GSRGSPGNQGPQGPSGPQG 216
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 478 RSNRST-GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
R R T G + G++G G G G G G PGD+G G
Sbjct: 464 RGERGTDGKPGAMGERGPQGETGPTGLTGPTGKPGDRGSNG 504
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG RG PG PG G +G PG
Sbjct: 803 KGERGSPGEPGKAGKQGPPG 822
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G++ +G G G++G GR+G G G G PG
Sbjct: 531 GASGRRGAPGAKGSRGERGRVGPPGIDGKDGAPG 564
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G +N G KG++G G G AG+ G G G G G P
Sbjct: 789 GINGTNGRGGIPGLKGERGSPGEPGKAGKQGPPGPSGPLGANGEP 833
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G RG PG G QGP+G PG
Sbjct: 45 QGMRGDPGPQGDQGPQGPPG 64
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGP---QGPRGLPG 436
+P + GN G PG GP QGP+G PG
Sbjct: 418 MPGVAGKNGNAGEPGERGPVGPQGPQGAPG 447
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G +G G+PG QGP GLPG
Sbjct: 438 GPQGPQGAPGTQGPPGLPG 456
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + S G G+ G G KG G G G PG +G G P
Sbjct: 213 GPQGSKGQAGIDGRPGEPGLPGDKGAMGGPGPAGQPGIRGPSGAP 257
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA + G+T GD+G G+ G G G G G GR G
Sbjct: 255 GAPGITGNPGATGINGDRGPNGSPGPRGAPGPPGKRGKIGRVG 297
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 341 APGCCV-PKCFAEKGNRGFPGSPGPQGPRGLPG 436
APG P G+RG GSPGP+G G PG
Sbjct: 256 APGITGNPGATGINGDRGPNGSPGPRGAPGPPG 288
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
+G S+G G G G AG G +G G QG G P
Sbjct: 410 SGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGPQGAP 446
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + + G+ G GKTG G G G G PG G G
Sbjct: 438 GPQGPQGAPGTQGPPGLPGKTGESGPRGERGTDGKPGAMGERG 480
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ +KG +G+ G G G G G+PG G G P
Sbjct: 537 GAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPP 572
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PGP GP G PG
Sbjct: 657 GMSGPPGRPGPPGPPGPPG 675
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 496 GSTWSKGD-KGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GST + G KG AG G G+PG +G PG+P
Sbjct: 65 GSTQTAGGIKGPDPNDLAAGIKGSNGAPGPRGSPGLP 101
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+KGNRG G G QGP G+ G
Sbjct: 865 DKGNRGPRGEKGEQGPPGVAG 885
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 520 KGKTGAKGFAGRMGIQGSPGDQGRPG 597
KG+ G G G +G QG G+ G+PG
Sbjct: 9 KGQRGPDGPPGDIGDQGPSGEAGKPG 34
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G +G G+PGP+G GLPG
Sbjct: 84 GIKGSNGAPGPRGSPGLPG 102
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPGH 439
G +G G+PG +G RGLPG+
Sbjct: 168 GLQGVRGAPGNEGARGLPGN 187
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G RG PG+PG +G RG G
Sbjct: 179 EGARGLPGNPGLKGKRGATG 198
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G +KG G +G G G +G +G G +G G P
Sbjct: 615 GIKGAKGVMGSSGRPGITGTLGQRGRLGSKGGEGTP 650
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+P E+G+ G PG G QGP G G
Sbjct: 799 IPGLKGERGSPGEPGKAGKQGPPGPSG 825
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 341 APGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
APG P +G G G GP+GP G PG
Sbjct: 139 APGA--PGSPGAEGKVGLTGQTGPRGPTGPPG 168
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPGH 439
+ G RG G PG QG RG PG+
Sbjct: 157 QTGPRGPTGPPGLQGVRGAPGN 178
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G+ G G PGPQGP G G
Sbjct: 564 GSDGLNGPPGPQGPAGEKG 582
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+P G G PG PGP GP G G
Sbjct: 655 MPGMSGPPGRPGPPGPPGPPGPSGPSG 681
>SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18)
Length = 427
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 481 SNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
+N G ++G G G G G G G+PGDQGR G+P
Sbjct: 109 NNGIIGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVP 149
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G +GFPG+PG QG +G+PG
Sbjct: 132 GLKGFPGTPGDQGRQGVPG 150
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +2
Query: 317 TAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
TAI N G +P + KG+RG PG G G RG PG
Sbjct: 240 TAILPNKAMIGA-IPPFYGPKGDRGVPGRQGMYGLRGPPG 278
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
KGD+G G +G G G G GDQG G P
Sbjct: 259 KGDRGVPGRQGMYGLRGPPGRKGDQGTRGPP 289
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 353 CVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
C + KG G PG PG GP G PG
Sbjct: 202 CGMRFQGSKGTPGAPGDPGLYGPPGPPG 229
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KGN+GFPG G G GL G
Sbjct: 116 KGNQGFPGPMGLDGIPGLKG 135
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQG 588
G +G GAKG G G G PG G
Sbjct: 150 GKRGYDGAKGREGEDGANGPPGSPG 174
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G SKG+KG G +G G G G PG G+PGI
Sbjct: 29 GPPGSKGEKGNRGRRGRRGPRGPPGKPGADGKPGI 63
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P EKGNRG G GP+GP G PG
Sbjct: 31 PGSKGEKGNRGRRGRRGPRGPPGKPG 56
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+K + G +G +G G G G+ GI+G PG +G G
Sbjct: 32 GSKGEKGNRGRRGRRGPRGPPGKPGADGKPGIRGPPGPKGDKG 74
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G KG+ G +G GR G +G PG G G P
Sbjct: 26 GPAGPPGSKGEKGNRGRRGRRGPRGPPGKPGADGKP 61
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPG 579
G KGDKG+ KG AG G++G PG
Sbjct: 65 GPPGPKGDKGE---KGDAGPRGLKGDPG 89
>SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10)
Length = 106
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 481 SNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
+N G ++G G G G G G G+PGDQGR G+P
Sbjct: 8 NNGIMGLKGNQGFPGPMGLDGIPGLKGFPGTPGDQGRQGVP 48
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G +GFPG+PG QG +G+PG
Sbjct: 31 GLKGFPGTPGDQGRQGVPG 49
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KGN+GFPG G G GL G
Sbjct: 15 KGNQGFPGPMGLDGIPGLKG 34
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQG 588
G +G GAKG G G G PG G
Sbjct: 49 GKRGDDGAKGREGEDGANGPPGSPG 73
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 490 STGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
S+G ++G G G+ G AGR G G+ GD+G+PG P
Sbjct: 357 SSGVPGAQGMPGPRGSTGEAGRQGPPGANGDRGQPGAP 394
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 475 KRSNRS-TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
KR R TG G +GK GA G G GI+G+ G QG PG+
Sbjct: 584 KRGQRGETGEQGLPGARGKQGANGPRGPRGIKGASGLQGGPGL 626
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ + G+KG G++G GR+G G G +G+ GIP
Sbjct: 395 GAEGAMGEKGNQGSRGPTGRVGPDGKTGPKGQNGIP 430
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GAK + G +G +G+TG +G G G QG+ G +G GI
Sbjct: 571 GAKGAKGHEGGRGKRGQRGETGEQGLPGARGKQGANGPRGPRGI 614
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K S G + + G KG G +G G+ G +G G+QG PG
Sbjct: 556 GPKGDRGSPGVSGASGAKGAKGHEGGRGKRGQRGETGEQGLPG 598
Score = 34.3 bits (75), Expect = 0.077
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 481 SNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
+N G T G G G +G AG G G GD+G PG+
Sbjct: 527 ANGQRGVTGPSGSPGPGGLQGAAGMPGPAGPKGDRGSPGV 566
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G T +G+ G GA+G G G+QG G QG+ G P
Sbjct: 688 GITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPP 723
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+KG+ G PGS GP GP G PG
Sbjct: 142 QKGSSGDPGSEGPVGPPGKPG 162
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GS G G GAKG G G +G G+ G G+P
Sbjct: 562 GSPGVSGASGAKGAKGHEGGRGKRGQRGETGEQGLP 597
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ +G G G +G G G+QG PG QG PG
Sbjct: 598 GARGKQGANGPRGPRGIKGASGLQGGPGLQG-PG 630
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
TGS ++G G+ G +G G G +G PG +G GI
Sbjct: 696 TGSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGI 731
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + G+ G KG+ G +G AG+ G G PG G G
Sbjct: 805 GPQGPEGEAGANGVSGPKGEMGPEGEAGQPGPPGPPGPNGPVG 847
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/22 (59%), Positives = 16/22 (72%), Gaps = 3/22 (13%)
Frame = +2
Query: 380 GNRGFPGSPGPQGP---RGLPG 436
G+ G G+PGPQGP RG+PG
Sbjct: 760 GSDGAQGNPGPQGPTGTRGIPG 781
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G +N +G G +G+ G G G G G G G+PG P
Sbjct: 811 GEAGANGVSGPKGEMGPEGEAGQPGPPGPPGPNGPVGQTGQPGTP 855
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E+G +G G PG +GP G PG
Sbjct: 139 EQGQKGSSGDPGSEGPVGPPG 159
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G G PG GP+G RG PG
Sbjct: 546 QGAAGMPGPAGPKGDRGSPG 565
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G S+G G+ G G AG G+ G G G G P
Sbjct: 724 GPKGSRGIAGEAGPDGPAGPAGLDGKNGINGEDGAP 759
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G N G + G G G G G G +G PG QG+ G
Sbjct: 745 GLDGKNGINGEDGAPGSDGAQGNPGPQGPTGTRGIPGPQGKNG 787
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PGP G G PG
Sbjct: 847 GQTGQPGTPGPDGAAGEPG 865
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPGH 439
KG+RG PG G G +G GH
Sbjct: 558 KGDRGSPGVSGASGAKGAKGH 578
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G RG G+ GP+GPRG+ G
Sbjct: 598 GARGKQGANGPRGPRGIKG 616
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E G G PG PGP GP G G
Sbjct: 830 EAGQPGPPGPPGPNGPVGQTG 850
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG+RG G GP GP G G
Sbjct: 726 KGSRGIAGEAGPDGPAGPAG 745
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G G PG PGP GP G G
Sbjct: 828 EGEAGQPGPPGPPGPNGPVG 847
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G G G PGPQGP G G
Sbjct: 795 RGPSGKNGEPGPQGPEGEAG 814
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
KG+ G TG KG +G G+ GSPG G G P
Sbjct: 3592 KGETGTTGVKGESGTPGLDGSPGKDGPTGSP 3622
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
TG+T KG+ G G G G+ G GSPGD G G
Sbjct: 3595 TGTTGVKGESGTPGLDGSPGKDGPTGSPGDPGSKG 3629
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + G+ +KGDKG G G G G +G G+ G PG P
Sbjct: 3629 GDRGETGDVGAAGAKGDKGDVGPVGIRGFKGNKGMKGEVGPPGPP 3673
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + +TG+ S+G G G G G G QG G +G PG P
Sbjct: 3707 GPRGEKGNTGAPGSQGSTGPRGPIGQPGMAGSQGEKGGKGDPGFP 3751
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 472 AKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
AK G + G KG+ GA+G G G G+PG QG G
Sbjct: 3684 AKGDKGERGFPGNNGGKGERGAQGPRGEKGNTGAPGSQGSTG 3725
Score = 34.7 bits (76), Expect = 0.058
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 490 STGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQG---RPGIP 603
S G KGD G G G AG G+QG G +G PGIP
Sbjct: 3738 SQGEKGGKGDPGFPGLPGQAGLRGLQGPEGQKGSIGAPGIP 3778
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 490 STGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
S G SKGD+G+TG G AG G +G G G G
Sbjct: 3621 SPGDPGSKGDRGETGDVGAAGAKGDKGDVGPVGIRG 3656
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G G G G+ GSPG G PGIP
Sbjct: 3456 GFPGLKGEIGLIGPPGLAGSPGQTGAPGIP 3485
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G+TGA G GR G G PG G G P
Sbjct: 3474 GSPGQTGAPGIPGRNGTAGPPGFPGLKGSP 3503
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 490 STGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
S GST +G G+ G G G G +G PG G PG
Sbjct: 3720 SQGSTGPRGPIGQPGMAGSQGEKGGKGDPGFPGLPG 3755
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRG 427
EKGN G PGS G GPRG
Sbjct: 3711 EKGNTGAPGSQGSTGPRG 3728
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPG--DQGRPG 597
KGDKG G GF G G G PG +G+PG
Sbjct: 3330 KGDKGFPGMVGFPGLRGKTGLPGKPGKGKPG 3360
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+KG RGFPG+ G +G RG G
Sbjct: 3687 DKGERGFPGNNGGKGERGAQG 3707
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
KG++G G G G G QG G++G G P
Sbjct: 3688 KGERGFPGNNGGKGERGAQGPRGEKGNTGAP 3718
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG+ GFPG PG G RGL G
Sbjct: 3745 KGDPGFPGLPGQAGLRGLQG 3764
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K S G + G G G G G GIQGS G G PG
Sbjct: 3498 GLKGSPGERGLSGIDGPPGDAGPVGPRGINGIQGSQGVPGEPG 3540
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ +G+KG TGA G G G +G G G G
Sbjct: 3704 GAQGPRGEKGNTGAPGSQGSTGPRGPIGQPGMAG 3737
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +1
Query: 463 T*GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
T G K G KG+ G G G AG G G+PG GR G
Sbjct: 3445 TKGVKGEPGVPGFPGLKGEIGLIGPPGLAGSPGQTGAPGIPGRNG 3489
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E G G GSPG GP G PG
Sbjct: 3603 ESGTPGLDGSPGKDGPTGSPG 3623
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K + G KG+ G G++G G G G PG G G
Sbjct: 3698 GGKGERGAQGPRGEKGNTGAPGSQGSTGPRGPIGQPGMAGSQG 3740
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 395 PGSPGPQGPRGLPG 436
PG PGPQGP G PG
Sbjct: 3823 PGPPGPQGPPGPPG 3836
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
KG++G G G G G +G PG G PG+
Sbjct: 3315 KGEQGPQGPPGLKGIKGDKGFPGMVGFPGL 3344
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+KG+ G PG PG G +G+PG
Sbjct: 3768 QKGSIGAPGIPGKIGEKGVPG 3788
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Frame = +2
Query: 377 KGNRGFPGS---PGPQGPRGLPG 436
KG++GFPG PG +G GLPG
Sbjct: 3330 KGDKGFPGMVGFPGLRGKTGLPG 3352
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G K G G +G G +G G +G G PG G G+P
Sbjct: 3743 GGKGDPGFPGLPGQAGLRGLQGPEGQKGSIGAPGIPGKIGEKGVP 3787
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G N + G +G KG++G++G G G+QG G QG GI
Sbjct: 98 GPPGPNGAPGRPGVRGPKGESGSRGLPGNHGVQGERGSQGGRGI 141
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GD GK G G AG MG++G PG GR G
Sbjct: 206 GDPGKKGMAGRAGAMGMRGLPGPPGRRG 233
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G G +G KG++G G+QG G+ G PG
Sbjct: 26 GPRGMRGKAGMSGPKGYSGEKGMQGDRGENGLPG 59
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
TG +G G+TG G G +G QGS G G+PG P
Sbjct: 1113 TGEQGVQGQSGETGGLGPTGPVGEQGSYGLPGKPGSP 1149
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G+TG G GR G+ G+ GD G PG
Sbjct: 407 GSRGRTGYPGRNGRQGMPGADGDDGVPG 434
Score = 34.3 bits (75), Expect = 0.077
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G G G G +G G +G+QG PG G PG+
Sbjct: 233 GKRGDPGSDGIPGERGDRGILGVQGEPGKDGSPGL 267
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + S G GD+GK G G G+ G+ G G G G+P
Sbjct: 182 GIQGSEGPYGPQGMTGDRGKPGLVGDPGKKGMAGRAGAMGMRGLP 226
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E+G+ G PG PG G +GLPG
Sbjct: 1136 EQGSYGLPGKPGSPGTKGLPG 1156
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 475 KRSNRST-GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
KR R G G +G G +G G+ G +G PG G PG P
Sbjct: 66 KRGRRGKPGPEGPAGVQGMEGRQGVQGKDGEEGPPGPNGAPGRP 109
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G + G G+ G G +G G G QG GD+G+PG+
Sbjct: 161 GGRGDRGPVGPVGVIGNPGLMGIQGSEGPYGPQGMTGDRGKPGL 204
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + G G TG G G G+ G PG G G+P
Sbjct: 1120 GQSGETGGLGPTGPVGEQGSYGLPGKPGSPGTKGLP 1155
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G +GK G +G AG G++G G QG+ G
Sbjct: 62 GHQGKRGRRGKPGPEGPAGVQGMEGRQGVQGKDG 95
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 523 GKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G+ GR G QG PG G G+P
Sbjct: 407 GSRGRTGYPGRNGRQGMPGADGDDGVP 433
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G +G +GK G G G G +G GD+G G+P
Sbjct: 23 GRRGPRGMRGKAGMSGPKGYSGEKGMQGDRGENGLP 58
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+P +G RG G PGP+GP G+ G
Sbjct: 57 LPGKLGHQGKRGRRGKPGPEGPAGVQG 83
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 344 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
PG PK E G+RG PG+ G QG RG G
Sbjct: 109 PGVRGPK--GESGSRGLPGNHGVQGERGSQG 137
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + + S G G+KG G +G G +G+ G+PG G G
Sbjct: 143 GGRGNEGSAGIPGRAGNKGGRGDRGPVGPVGVIGNPGLMGIQG 185
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G G G G AG MG++G G +G PG
Sbjct: 425 GADGDDGVPGSAGLMGVRGPVGPEGLPG 452
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G RG PG PG +G RG PG
Sbjct: 221 GMRGLPGPPGRRGKRGDPG 239
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GD G+ GA G G MG++G G +G G
Sbjct: 5 GDPGRLGAIGNPGPMGLKGRRGPRGMRG 32
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAK---GFAGRMGIQGSPGDQGRPG 597
+G G+KG G + G G++G QG G +G+PG
Sbjct: 37 SGPKGYSGEKGMQGDRGENGLPGKLGHQGKRGRRGKPG 74
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGR 591
G GK G +G +G G GSPG QG+
Sbjct: 1180 GKDGKPGTQGVSGNDGPIGSPGLQGK 1205
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G+ G G GP GP GLPG
Sbjct: 434 GSAGLMGVRGPVGPEGLPG 452
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
++G RG PG GP G +G+ G
Sbjct: 66 KRGRRGKPGPEGPAGVQGMEG 86
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRG 427
+G +GF G+PGP G G
Sbjct: 521 RGEQGFTGNPGPDGKNG 537
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G +GA GF G G QG PG G PG P
Sbjct: 259 GQAGTSGAPGFPGAPGFQGPPGLDGMPGAP 288
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + G G GA GF G G+ G PG G PG
Sbjct: 259 GQAGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPG 292
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ +G G G G G G QG PG G PGIP
Sbjct: 271 GAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPGIP 306
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G GFPG+PG QGP GL G
Sbjct: 265 GAPGFPGAPGFQGPPGLDG 283
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
+G G G G +G G G+PG QG PG+
Sbjct: 252 QGPPGLNGQAGTSGAPGFPGAPGFQGPPGL 281
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G +G+ G G G PG G PG P
Sbjct: 286 GAPGMPGPQGYPGGSGAPGIPGSPGMPGPP 315
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PG GP+G PG
Sbjct: 280 GLDGMPGAPGMPGPQGYPG 298
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 520 KGKTGAKGFAGRMGIQGSPGDQGRPG 597
KG G G G+ G G+PG G PG
Sbjct: 249 KGLQGPPGLNGQAGTSGAPGFPGAPG 274
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 484 NRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
N G++ + G G G +G G G+ G+PG G G P
Sbjct: 258 NGQAGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGYP 297
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +2
Query: 341 APGCCVPKCF-AEKGNRGFPGSPGPQGPRGLPG 436
APG P+ + G G PGSPG GP G G
Sbjct: 287 APGMPGPQGYPGGSGAPGIPGSPGMPGPPGPAG 319
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +1
Query: 457 ART*GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGI---QGSPGDQGRPGIP 603
A T GA + G G G GA G G G G+PG G PG+P
Sbjct: 261 AGTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPGGSGAPGIPGSPGMP 312
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/43 (46%), Positives = 21/43 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T G KG TGA G AG G G GD G G
Sbjct: 148 GPKGDTGATGPTGPTGPKGDTGATGPAGPTGPTGPKGDTGATG 190
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
TG+T G KG TGA G AG G G GD G G
Sbjct: 261 TGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATG 295
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T KGD G TG G G G G+ G G G
Sbjct: 16 GPKGDTGATGPTGPKGDTGATGPTGPTGPKGDTGATGPTGPTG 58
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T KGD G TG G G G G G +G G
Sbjct: 58 GPKGDTGATGPTGPKGDTGATGPTGPKGDTGATGPNGPKGDTG 100
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T KGD G TG G G G G G G G
Sbjct: 70 GPKGDTGATGPTGPKGDTGATGPNGPKGDTGATGPAGPTGPTG 112
Score = 34.3 bits (75), Expect = 0.077
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQG 588
TG+T G KG TGA G AG G G GD G
Sbjct: 87 TGATGPNGPKGDTGATGPAGPTGPTGPKGDTG 118
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T KGD G TG G G G G+ G G G
Sbjct: 136 GPKGDTGATGPTGPKGDTGATGPTGPTGPKGDTGATGPAGPTG 178
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T KGD G TG G G G +G G G G
Sbjct: 256 GPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAG 298
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T KGD G TG G G G G G G G
Sbjct: 4 GPKGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTGPKG 46
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T G KG TGA G G G G GD G G
Sbjct: 223 GPKGEIGATGPTDPTGPKGDTGATGPTGPTGPTGPKGDTGATG 265
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T G KG TGA G G G +G G G G
Sbjct: 28 GPKGDTGATGPTGPTGPKGDTGATGPTGPTGPKGDTGATGPTG 70
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T G KG TGA G G G G+ G G G
Sbjct: 43 GPKGDTGATGPTGPTGPKGDTGATGPTGPKGDTGATGPTGPKG 85
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +1
Query: 484 NRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
N TG+T G KG TGA G G G G+ G G G
Sbjct: 126 NGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTG 163
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +TG T KGD G TG G G G G G G G
Sbjct: 124 GPNGDTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTGPKG 166
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPG 579
G K +TG KGD G TG G G G +G G
Sbjct: 82 GPKGDTGATGPNGPKGDTGATGPAGPTGPTGPKGDTG 118
>SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09)
Length = 234
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA+ G +G+ GK G G GR G +G PG G PG
Sbjct: 25 GARGGGGVKGEKGYRGELGKVGPSGPQGRKGFKGEPGPPGLPG 67
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K G G G G KGF G G G PG+QG G
Sbjct: 31 GVKGEKGYRGELGKVGPSGPQGRKGFKGEPGPPGLPGEQGPQG 73
Score = 31.9 bits (69), Expect = 0.41
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
KG+KG G G G G QG G +G PG P
Sbjct: 33 KGEKGYRGELGKVGPSGPQGRKGFKGEPGPP 63
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G ++G G G KG+ G +G G G QGR G
Sbjct: 22 GVKGARGGGGVKGEKGYRGELGKVGPSGPQGRKG 55
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
EKG RG G GP GP+G G
Sbjct: 35 EKGYRGELGKVGPSGPQGRKG 55
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRG 427
KG G PG PG QGP+G
Sbjct: 57 KGEPGPPGLPGEQGPQG 73
>SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11)
Length = 476
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 508 SKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
SKG +G G +G G G QG G +G PG P
Sbjct: 381 SKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTP 412
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G T +KGD+G G +G G G +G G QG G+
Sbjct: 132 GPTGAKGDQGPEGIQGPQGIRGPEGPQGPQGPQGL 166
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 365 CFAEKGNRGFPGSPGPQGPRGLPG 436
C + +G RG PG GP GP+G G
Sbjct: 112 CKSRRGKRGEPGPQGPPGPQGPTG 135
Score = 31.5 bits (68), Expect = 0.54
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 472 AKRSNRST-GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
++R R G G +G TGAKG G GIQG G +G G
Sbjct: 114 SRRGKRGEPGPQGPPGPQGPTGAKGDQGPEGIQGPQGIRGPEG 156
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 362 KCFAEKGNRGFPGSPGPQGPRGLPG 436
+C K RG G PGPQGP G G
Sbjct: 108 ECITCKSRRGKRGEPGPQGPPGPQG 132
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRP 594
G+K G+ +G+KG G +G G G G+ G+ G P
Sbjct: 380 GSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPGAKGESGGP 421
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G RG G GPQGP+GL G
Sbjct: 149 QGIRGPEGPQGPQGPQGLEG 168
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G++G G G G MG +G PG +G PG+P
Sbjct: 15 GEQGDAGPPGPEGNMGPRGQPGPEGSPGLP 44
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G + + STG G G G KG G G QG PG +G+PG+
Sbjct: 247 GVRGPDGSTGERGETGLDGAPGKKGEDGTKGEQGVPGAKGQPGL 290
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 463 T*GAKRSNRSTGSTWSKGDKGKTGAK--GFAGRMGIQGSPGDQGRPGIP 603
T G S TG G KG GA+ G G +G G PG QG PG P
Sbjct: 64 TIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAP 112
Score = 34.3 bits (75), Expect = 0.077
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ G G GF G +G PGD GRPG+P
Sbjct: 582 GNPGDPGVMGFPGEPQ-RGEPGDPGRPGLP 610
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GAK + G + G G G G AG G G G+ G PGIP
Sbjct: 956 GAKGESGQPGMRGADGLSGPPGFDGQAGETGAIGFKGEPGTPGIP 1000
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GD G G KG AG G G PG+ G G+P
Sbjct: 864 GDNGPRGKKGEAGSDGRPGFPGESGANGLP 893
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRP 594
G+KG++G GF G +G G+ G++G P
Sbjct: 378 GEKGQSGEPGFPGEIGEAGTQGEKGNP 404
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G+ GA G GR G G G G PG+P
Sbjct: 512 GPPGENGAFGLPGRKGDSGDRGPDGNPGLP 541
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G KG+ G G GF G G G PG G G P
Sbjct: 867 GPRGKKGEAGSDGRPGFPGESGANGLPGPPGLAGSP 902
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
TG+ KG+ G G GF G G G G G PG P
Sbjct: 985 TGAIGFKGEPGTPGIPGFPGLTGSSGRDGLDGSPGRP 1021
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +1
Query: 487 RSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
R TG G KGK GA G G G +G GD G PG
Sbjct: 47 RGTGGV--PGPKGKQGAPGTIGFPGSRGDTGDLGPPG 81
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +1
Query: 520 KGKTGAKGFAGRMGIQGSPGD--QGRPGIP 603
+G G++GF G+ G +G PGD G PG P
Sbjct: 558 RGGVGSQGFQGQKGFKGDPGDAIPGNPGDP 587
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G+ G G G G GI G PG +G PGI
Sbjct: 480 GNPGPNGPAGATGPPGIPGFPGQKGEPGI 508
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ G GK GAKG +G+ G++G+ G G PG
Sbjct: 944 GAAGLDGMPGKPGAKGESGQPGMRGADGLSGPPG 977
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ +G G G+ G G G G PG +G+ G P
Sbjct: 27 GNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAP 62
Score = 31.9 bits (69), Expect = 0.41
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + +G +G G +G GF G+ G G+ G +G PG P
Sbjct: 953 GKPGAKGESGQPGMRGADGLSGPPGFDGQAGETGAIGFKGEPGTP 997
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ G G G G G +G +G PG G PG P
Sbjct: 968 GADGLSGPPGFDGQAGETGAIGFKGEPGTPGIPGFP 1003
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG RG G+PGP GP G G
Sbjct: 473 KGLRGMTGNPGPNGPAGATG 492
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMG--IQGSPGDQGRPGIP 603
G +G G KGF G G I G+PGD G G P
Sbjct: 562 GSQGFQGQKGFKGDPGDAIPGNPGDPGVMGFP 593
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G GSPGP+GP G PG
Sbjct: 894 GPPGLAGSPGPRGPNGEPG 912
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G +G G +G G G G PG++G G+P
Sbjct: 18 GDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVP 53
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+GN G G PGP+G GLPG
Sbjct: 26 EGNMGPRGQPGPEGSPGLPG 45
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G N G G G+ G G +G G+ G PG G PG
Sbjct: 861 GPPGDNGPRGKKGEAGSDGRPGFPGESGANGLPGPPGLAGSPG 903
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRP 594
+G GD G G G+ G G +G PG +G P
Sbjct: 335 SGPLGDPGDNGIDGISGYPGVPGRKGDPGQKGDP 368
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G K TG+ G G TG G G G +G PG RPG P
Sbjct: 471 GFKGLRGMTGNPGPNGPAGATGPPGIPGFPGQKGEPG-ISRPGPP 514
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E+G+ G PG G GPRG PG
Sbjct: 16 EQGDAGPPGPEGNMGPRGQPG 36
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 532 GAKGFAGRMGIQGSPGDQGRPGIP 603
G G AG +G G PG +G PG P
Sbjct: 300 GESGAAGDLGPDGPPGPKGAPGAP 323
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G + G G +G +G G+ G G PGD G GI
Sbjct: 315 GPKGAPGAPGFSGIEGLKGQSGPLGDPGDNGIDGI 349
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+ G RG PG PGP GP G G
Sbjct: 927 DAGPRGPPGEPGPPGPFGAAG 947
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G G KG++G G G G+ G PG G+ G
Sbjct: 950 GMPGKPGAKGESGQPGMRGADGLSGPPGFDGQAG 983
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G S G G+ G G G G QG+PG G PG
Sbjct: 36 GPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPG 69
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E G+ G PG PG G GLPG
Sbjct: 874 EAGSDGRPGFPGESGANGLPG 894
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G RG G PGP+G +G PG
Sbjct: 45 GERGTGGVPGPKGKQGAPG 63
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G + ++ +G G G+TGA GF G G+PG G PG+
Sbjct: 965 GMRGADGLSGPPGFDGQAGETGAIGFKGE---PGTPGIPGFPGL 1005
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G KG G G G G+QG PG +G P
Sbjct: 145 GPKGMDGPPGEKGLPGVQGDPGIKGPKAEP 174
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P F G G PG PG +G G PG
Sbjct: 940 PGPFGAAGLDGMPGKPGAKGESGQPG 965
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G+RG G GP G +GLPG
Sbjct: 69 GSRGDTGDLGPPGAKGLPG 87
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
++G RG G G GP+GLPG
Sbjct: 425 KEGPRGPDGRDGQSGPKGLPG 445
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRG 427
G+ G PG PGP GP G
Sbjct: 1438 GDDGVPGQPGPPGPPG 1453
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E G RG PG PG G RG G
Sbjct: 233 ETGPRGRPGEPGADGVRGPDG 253
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/64 (28%), Positives = 23/64 (35%)
Frame = +2
Query: 245 PIKTEPELGQNFAVYDPDTRQRTSTAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPR 424
P+ E GQ+ P T + P + K KG G G GP+GP
Sbjct: 373 PVPDHGEKGQSGEPGFPGEIGEAGTQGEKGNPPPTPIIIKYKGPKGTSGAQGKEGPRGPD 432
Query: 425 GLPG 436
G G
Sbjct: 433 GRDG 436
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G G+KGK +G G G+ G PG G PG
Sbjct: 1423 GKPGLSGNKGK---EGLPGDDGVPGQPGPPGPPG 1453
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G++G G G G MG +G PG +G PG+P
Sbjct: 15 GEQGDAGPPGPEGNMGPRGQPGPEGSPGLP 44
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +1
Query: 463 T*GAKRSNRSTGSTWSKGDKGKTGAK--GFAGRMGIQGSPGDQGRPGIP 603
T G S TG G KG GA+ G G +G G PG QG PG P
Sbjct: 64 TIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAP 112
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +1
Query: 487 RSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
R TG G KGK GA G G G +G GD G PG
Sbjct: 47 RGTGGV--PGPKGKQGAPGTIGFPGSRGDTGDLGPPG 81
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ +G G G+ G G G G PG +G+ G P
Sbjct: 27 GNMGPRGQPGPEGSPGLPGERGTGGVPGPKGKQGAP 62
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G +G G +G G G G PG++G G+P
Sbjct: 18 GDAGPPGPEGNMGPRGQPGPEGSPGLPGERGTGGVP 53
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+GN G G PGP+G GLPG
Sbjct: 26 EGNMGPRGQPGPEGSPGLPG 45
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E+G+ G PG G GPRG PG
Sbjct: 16 EQGDAGPPGPEGNMGPRGQPG 36
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G S G G+ G G G G QG+PG G PG
Sbjct: 36 GPEGSPGLPGERGTGGVPGPKGKQGAPGTIGFPG 69
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G RG G PGP+G +G PG
Sbjct: 45 GERGTGGVPGPKGKQGAPG 63
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G KG G G G G+QG PG +G P
Sbjct: 145 GPKGMDGPPGEKGLPGVQGDPGIKGPKAEP 174
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G+RG G GP G +GLPG
Sbjct: 69 GSRGDTGDLGPPGAKGLPG 87
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E G RG PG PG G RG G
Sbjct: 233 ETGPRGRPGEPGADGVRGPDG 253
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KGDKG TGA G G+ G QG G+ G G
Sbjct: 80 GPKGDKGDKGDTGAPGIDGQPGPQGEKGETGPQG 113
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K + S G+ S G G G KG G G G+PG G+PG
Sbjct: 59 GPKGDSGSPGAVGSPGPMGPEGPKGDKGDKGDTGAPGIDGQPG 101
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KGD G GA G G MG +G GD+G G
Sbjct: 56 GPQGPKGDSGSPGAVGSPGPMGPEGPKGDKGDKG 89
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + N G KGD+G G +G G G G G G PG
Sbjct: 8 GPQGDNGRDGPIGPKGDQGDIGPQGPPGERGFSGKDGLNGTPG 50
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G G +GF+G+ G+ G+PG G G
Sbjct: 29 GPQGPPGERGFSGKDGLNGTPGKDGPEG 56
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA + G KG+ G G +G G G QG PG +G G
Sbjct: 92 GAPGIDGQPGPQGEKGETGPQGEQGPKGDTGPQGQPGPEGPQG 134
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
+G G GK G +G G G GSPG G PG
Sbjct: 40 SGKDGLNGTPGKDGPEGPQGPKGDSGSPGAVGSPG 74
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG+ G G PGP+GP+G G
Sbjct: 118 KGDTGPQGQPGPEGPQGPAG 137
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+ G+ G GSPGP GP G G
Sbjct: 63 DSGSPGAVGSPGPMGPEGPKG 83
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G G G G G G G QG GD G PG
Sbjct: 35 GERGFSGKDGLNGTPGKDGPEGPQGPKGDSGSPG 68
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+ G +G PG GPQGP G G
Sbjct: 120 DTGPQGQPGPEGPQGPAGPSG 140
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G +KG G+ G G G G+QGS G G+PG+P
Sbjct: 124 GPAGAKGGLGEPGTDGPPGDAGMQGSDGANGQPGLP 159
Score = 36.3 bits (80), Expect = 0.019
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
TG+ + G +G TG G G+ G QG PG QG PG
Sbjct: 302 TGTPGTVGLRGVTGPDGSNGQPGRQGEPGKQGLPG 336
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + + TG G G G +G G G G PG QG PG
Sbjct: 288 GDRGAQGKTGKQGPTGTPGTVGLRGVTGPDGSNGQPGRQGEPG 330
Score = 34.3 bits (75), Expect = 0.077
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G T +G G GAKG G G G PGD G G
Sbjct: 115 GETGQQGMLGPAGAKGGLGEPGTDGPPGDAGMQG 148
Score = 34.3 bits (75), Expect = 0.077
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GS G +GK G +G G+ G G PG G PG
Sbjct: 237 GSDGKAGKEGKAGDRGAIGKTGNAGLPGSTGAPG 270
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + + G + +GD G G KG G +G+ G+ G+QG G
Sbjct: 333 GLPGESGAQGDSGDEGDGGAKGDKGVFGGVGLDGAEGEQGARG 375
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GST + G G G+ G GR GI G G QG+ G
Sbjct: 264 GSTGAPGAAGSDGSVGKQGRKGITGDRGAQGKTG 297
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GAK G G +G+ GA+G +G G G PG G PG
Sbjct: 351 GAKGDKGVFGGVGLDGAEGEQGARGKSGDFGPIGPPGPLGPPG 393
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQG 588
GA+ + G +KGDKG G G G G QG+ G G
Sbjct: 339 GAQGDSGDEGDGGAKGDKGVFGGVGLDGAEGEQGARGKSG 378
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 481 SNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
S+ G GD+G G G AG G G+PG G G
Sbjct: 238 SDGKAGKEGKAGDRGAIGKTGNAGLPGSTGAPGAAGSDG 276
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G G G G G G PG GR G+P
Sbjct: 130 GGLGEPGTDGPPGDAGMQGSDGANGQPGLPGRDGVP 165
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ +G +GK+G G G G G PGD+G G
Sbjct: 366 GAEGEQGARGKSGDFGPIGPPGPLGPPGDRGMQG 399
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GD G G G G+ G +G+ G G G+P
Sbjct: 234 GDGGSDGKAGKEGKAGDRGAIGKTGNAGLP 263
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G+RG G G QGP G PG
Sbjct: 288 GDRGAQGKTGKQGPTGTPG 306
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
KGD G G+ G AG+ G G G G+ G
Sbjct: 230 KGDSGDGGSDGKAGKEGKAGDRGAIGKTG 258
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E+G RG PG PG GP GLPG
Sbjct: 307 EEGGRGRPGKPGADGPEGLPG 327
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + G T G G GA G +GR G QG PG G PG P
Sbjct: 16 GERGQQGPIGMTGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQP 60
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G ++G+KG++GA G G G G G +GRPG P
Sbjct: 282 GVRGAEGNKGESGAPGLIGAEGPVGEEGGRGRPGKP 317
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G K G S+G G G +G G G++G+ G++G G P
Sbjct: 252 GDKGQPGKPGKPGSRGQAGPAGKRGMIGDRGVRGAEGNKGESGAP 296
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G +G+ G G G G+ G GD GRPG
Sbjct: 303 GPVGEEGGRGRPGKPGADGPEGLPGPAGDDGRPG 336
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA+ G G G G +G G G G PG+ G PG
Sbjct: 300 GAEGPVGEEGGRGRPGKPGADGPEGLPGPAGDDGRPGENGAPG 342
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 8/44 (18%)
Frame = +1
Query: 496 GSTWSKGDKGKTGA--------KGFAGRMGIQGSPGDQGRPGIP 603
G+ +G+ G TGA +G G+ G +G GD+G+PG P
Sbjct: 217 GAAGPQGEAGPTGATFIMAFVFQGNVGKSGSKGESGDKGQPGKP 260
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
+G+ GK+G+KG +G G G PG G G
Sbjct: 239 QGNVGKSGSKGESGDKGQPGKPGKPGSRG 267
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ +KG+ G G G G +G +G G G+PG
Sbjct: 285 GAEGNKGESGAPGLIGAEGPVGEEGGRGRPGKPG 318
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G G PG+PG GPRG+ G
Sbjct: 48 QGPPGPPGAPGQPGPRGIKG 67
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PGP+G +G PG
Sbjct: 52 GPPGAPGQPGPRGIKGPPG 70
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
+GS GDKG+ G G G G G G +G G
Sbjct: 245 SGSKGESGDKGQPGKPGKPGSRGQAGPAGKRGMIG 279
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E G++G PG PG G RG G
Sbjct: 250 ESGDKGQPGKPGKPGSRGQAG 270
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PGS G GP G PG
Sbjct: 336 GENGAPGSRGNSGPAGFPG 354
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+K + G G G G G AG+ G+ G G +G G
Sbjct: 246 GSKGESGDKGQPGKPGKPGSRGQAGPAGKRGMIGDRGVRGAEG 288
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + + + G + + G G G G G G G PG G G+P
Sbjct: 282 GVRGAEGNKGESGAPGLIGAEGPVGEEGGRGRPGKPGADGPEGLP 326
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ +KG KG+ G G G G +G PG G G+P
Sbjct: 212 GAAGAKGAKGQPGPPGLVGEPGPEGEPGPVGPTGVP 247
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G G G GAKG G G+ G PG +G PG
Sbjct: 206 GEPGEPGAAGAKGAKGQPGPPGLVGEPGPEGEPG 239
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +1
Query: 511 KGDKGKTGA---KGFAGRMGIQGSPGDQGRPG 597
KGD+G+ GA KG G+ G +G G+ GRPG
Sbjct: 253 KGDRGEQGARGEKGEQGKTGERGPVGEAGRPG 284
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GD G G KG G G G+PGD+G G
Sbjct: 105 GDPGPKGNKGQPGAQGRPGAPGDRGERG 132
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRP 594
G K G+ KG++GKTG + G +G G PG G P
Sbjct: 251 GVKGDRGEQGARGEKGEQGKTGER---GPVGEAGRPGQNGLP 289
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G+ G+ GA G G G G PG G PG
Sbjct: 200 GEPGERGEPGEPGAAGAKGAKGQPGPPGLVGEPG 233
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 6/40 (15%)
Frame = +2
Query: 335 CTAPGC---CVPKC---FAEKGNRGFPGSPGPQGPRGLPG 436
C GC CVP RG PG PGP+G +G PG
Sbjct: 78 CCKDGCDFRCVPPIPPPTPPPQRRGPPGDPGPKGNKGQPG 117
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 526 KTGAKGFAGRMGIQGSPGDQGRPGIP 603
+ G G G G +G PG QGRPG P
Sbjct: 100 RRGPPGDPGPKGNKGQPGAQGRPGAP 125
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GD G TG G G G++GSPG +G G
Sbjct: 935 GDPGYTGKPGKYGDDGLEGSPGPRGPIG 962
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G K + G + GD+G+ G+ G G G G PG G G P
Sbjct: 111 GNKGQPGAQGRPGAPGDRGERGSAGSDGPKGEAGGPGPLGPIGPP 155
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KG+KG+ GA+G G G +G G G G
Sbjct: 105 GDPGPKGNKGQPGAQGRPGAPGDRGERGSAGSDG 138
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P + + G G PG GP GP+G PG
Sbjct: 943 PGKYGDDGLEGSPGPRGPIGPQGDPG 968
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P E G G PG GP G GLPG
Sbjct: 226 PGLVGEPGPEGEPGPVGPTGVPGLPG 251
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GAK G G +G+ G G G G+ G GD+G G
Sbjct: 218 GAKGQPGPPGLVGEPGPEGEPGPVGPTGVPGLPGVKGDRGEQG 260
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E G RG PG PG G +G G
Sbjct: 201 EPGERGEPGEPGAAGAKGAKG 221
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLP 433
+G RG G PGP GP G P
Sbjct: 970 EGERGQSGPPGPPGPPGPP 988
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGP 421
E+G G PG PGP GP
Sbjct: 972 ERGQSGPPGPPGPPGP 987
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 463 T*GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
T G + G G G+ GA G AG G++G PG G PG
Sbjct: 149 TQGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGVRGQPGAIGSPG 193
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 475 KRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
KR +R G+ +KG G G G G G +G PGD G PG
Sbjct: 125 KRGDR--GTPGAKGPPGLAGEPGEPGTQGPRGDPGDVGEPG 163
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G +GD+G GAKG G G G PG QG G P
Sbjct: 121 GLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDP 156
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +N + G +G G G+ G AGR G QG G +GR G
Sbjct: 169 GRNGANGTAGPPGVRGQPGAIGSPGDAGRAGPQGPQGAEGRTG 211
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G++GK G KG AG G G+PG G G
Sbjct: 436 GERGPRGEQGKQGEKGHAGEGGADGAPGIPGEQG 469
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRG 427
GN G PGSPGP GP+G
Sbjct: 481 GNAGSPGSPGPSGPKG 496
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ ++G++G G +G G G G G G PGIP
Sbjct: 430 GAPGAQGERGPRGEQGKQGEKGHAGEGGADGAPGIP 465
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Frame = +1
Query: 490 STGSTWSKGDKGKTGAKGFAGRMGIQGSP------GDQGRPGIP 603
S G KGD+G G G G G++G+P G++G PG P
Sbjct: 383 SPGLGGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGAP 426
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G K G + G G GA G G G +G PG GR G P
Sbjct: 388 GQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAP 432
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
+G G G+ G G+ G QG PG G PG
Sbjct: 375 QGRAGAPGSPGLGGQKGDQGMPGKPGNPG 403
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PG QGPRG PG
Sbjct: 139 GLAGEPGEPGTQGPRGDPG 157
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ + G +G GA+G G G G+PG G PG
Sbjct: 400 GNPGAAGLRGAPGARGDYGERGEPGAPGRDGAPG 433
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GA+ G +G+KG G G G GI G G G G P
Sbjct: 433 GAQGERGPRGEQGKQGEKGHAGEGGADGAPGIPGEQGPMGPVGAP 477
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G+ +GD G G G AG G G+ G G PG+
Sbjct: 148 GTQGPRGDPGDVGEPGEAGPSGRNGANGTAGPPGV 182
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 341 APGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
APG P +KG++G PG PG G GL G
Sbjct: 380 APGS--PGLGGQKGDQGMPGKPGNPGAAGLRG 409
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+P ++G+RG PG+ GP G G PG
Sbjct: 119 IPGLPGKRGDRGTPGAKGPPGLAGEPG 145
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ G G G G AG G G GD+G G+P
Sbjct: 235 GANGVPGSPGADGDTGEAGEHGADGLKGDRGADGLP 270
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E+G +G GS GP GPRG G
Sbjct: 218 ERGGKGPQGSRGPVGPRGANG 238
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG GP GP G PG
Sbjct: 460 GAPGIPGEQGPMGPVGAPG 478
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 526 KTGAKGFAGRMGIQGSPGDQGRPGI 600
+ G G G+ G +G+PG +G PG+
Sbjct: 116 RVGIPGLPGKRGDRGTPGAKGPPGL 140
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 532 GAKGFAGRMGIQGSPGDQGRPGIP 603
G G G G+ G GDQG PG P
Sbjct: 376 GRAGAPGSPGLGGQKGDQGMPGKP 399
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G +G G G +G PG G PG P
Sbjct: 118 GIPGLPGKRGDRGTPGAKGPPGLAGEPGEP 147
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 389 GFPGSPGPQGPRGLPG 436
G PG PG +G RG PG
Sbjct: 118 GIPGLPGKRGDRGTPG 133
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + G G G KG G G G+PG G G P
Sbjct: 376 GRAGAPGSPGLGGQKGDQGMPGKPGNPGAAGLRGAP 411
>SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07)
Length = 198
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA+ + G KGD+G G KG G G +G GDQG G
Sbjct: 101 GAQGARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKG 143
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G + + + G KGDKG G +G G G +G GD+G G+
Sbjct: 98 GLQGAQGARGLKGDKGDKGDQGIQGLKGDKGDKGEKGDKGDQGL 141
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 481 SNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
S R G ++G +G G KG G GIQG GD+G G
Sbjct: 93 SYRILGLQGAQGARGLKGDKGDKGDQGIQGLKGDKGDKG 131
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQG 570
G K G KGDKG+ G KG G G QG
Sbjct: 113 GDKGDQGIQGLKGDKGDKGEKGDKGDQGLKGNQG 146
>SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12)
Length = 104
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
TG+T G KG TGA G AG G G GD G G
Sbjct: 42 TGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATG 76
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T KGD G TG G G G +G G G G
Sbjct: 37 GPKGDTGATGPTGPKGDTGATGPAGPTGPTGPKGDTGATGPAG 79
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K +TG T G KG TGA G G G G GD G G
Sbjct: 4 GPKGEIGATGPTDPTGPKGDTGATGPTGPTGPTGPKGDTGATG 46
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 35.5 bits (78), Expect = 0.033
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G S + G KGD G GA G AG G G PG QG G P
Sbjct: 124 GPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPGPQGPMGPP 168
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G+ G G G G G G+QG+PG G PG P
Sbjct: 121 GAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAP 156
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GA + + G S G G G KG G G G+ G G PG+P
Sbjct: 115 GAPGAPGAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLP 159
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PGPQGP G PG
Sbjct: 151 GLPGAPGLPGPQGPMGPPG 169
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G G G G G G PG G PG+P
Sbjct: 100 GMAGPPGPPGHVGEDGAPGAPGAPGPPGSPGAPGLP 135
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 475 KRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
K N G + G G+ G G AG G G G+ G PG P
Sbjct: 78 KGLNGPPGPPGAPGPPGEPGQVGMAGPPGPPGHVGEDGAPGAP 120
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GA S G+ G+KG G +G G G+ G+PG G G
Sbjct: 121 GAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPGPQG 163
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P E G G PG+PGP G G PG
Sbjct: 108 PGHVGEDGAPGAPGAPGPPGSPGAPG 133
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G G G GA G G G G PG++G PG+
Sbjct: 109 GHVGEDGAPGAPGAPGPPGSPGAPGLPGEKGDPGL 143
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G G G G +G G+PG G PG P
Sbjct: 91 GPPGEPGQVGMAGPPGPPGHVGEDGAPGAPGAPGPP 126
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GA G G G G G G G G+PG G PG P
Sbjct: 88 GAPGPPGEPGQVGMAGPPGPPGHVGEDGAPGAPGAPGPPGSPGAP 132
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 368 FAEKGNRGFPGSPGPQGPRGLPG 436
F KG G PG PG GP G PG
Sbjct: 75 FFLKGLNGPPGPPGAPGPPGEPG 97
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 341 APGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+PG P EKG+ G G+PG G G PG
Sbjct: 128 SPGA--PGLPGEKGDPGLQGAPGAAGLPGAPG 157
>SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12)
Length = 299
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G KGDKG+ G +G G G G PG G+ GI
Sbjct: 140 GPPGPKGDKGRPGKRGRRGPAGPPGQPGADGKQGI 174
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG++G PG G +GP G PG
Sbjct: 145 KGDKGRPGKRGRRGPAGPPG 164
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPG 579
G KG+ G KG G G++G PG
Sbjct: 179 GIKGERGPKGDVGPRGLKGEPG 200
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 35.1 bits (77), Expect = 0.044
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KG G +G GR G GSPG +G PG
Sbjct: 141 GQKGTRGRRGQRGRRGNPGSPGPKGTPG 168
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
++G RG PGSPGP+G G G
Sbjct: 151 QRGRRGNPGSPGPKGTPGKDG 171
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G RG G+PG GP+G PG
Sbjct: 149 RGQRGRRGNPGSPGPKGTPG 168
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G+ G +G G+ G +G+PG G G P
Sbjct: 138 GHPGQKGTRGRRGQRGRRGNPGSPGPKGTP 167
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQG 588
G+ SKG KG+ G KG G +G++G G G
Sbjct: 174 GAVGSKGMKGQKGEKGERG-IGVRGEKGAPG 203
>SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 35.1 bits (77), Expect = 0.044
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ S G +GKTG +G G +G G+PG G+PG
Sbjct: 182 GTHGSPGWRGKTGPRGPMGPIGPPGTPGVPGQPG 215
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PGP GP G PG
Sbjct: 128 GKNGIPGHPGPPGPSGPPG 146
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + G G G G +G+ G G PG +GR G P
Sbjct: 140 GPSGPPGRNGLNGIPGVSGKQGPPGPPGKRGRRGHP 175
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
++G RG PG PG G G PG
Sbjct: 168 KRGRRGHPGEPGRNGTHGSPG 188
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G ++ S G G +G G G G G+ G PG G PG
Sbjct: 179 GRNGTHGSPGWRGKTGPRGPMGPIGPPGTPGVPGQPGKAGSPG 221
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+P + G G PG PGP GP G G
Sbjct: 123 IPGTHGKNGIPGHPGPPGPSGPPGRNG 149
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G GK G G G G G PG G GIP
Sbjct: 125 GTHGKNGIPGHPGPPGPSGPPGRNGLNGIP 154
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 475 KRSNRS-TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
KR R G G G G +G G G G G G PG+P
Sbjct: 168 KRGRRGHPGEPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPGVP 211
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G +G PG PG +G RG PG
Sbjct: 158 GKQGPPGPPGKRGRRGHPG 176
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 35.1 bits (77), Expect = 0.044
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + N S G G +G G +G G MG+ GS G G PG
Sbjct: 422 GPRGYNGSIGPQGLAGAEGHNGTQGIQGPMGVNGSAGVPGPPG 464
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G S G +G GA+G G GIQG G G G+P
Sbjct: 425 GYNGSIGPQGLAGAEGHNGTQGIQGPMGVNGSAGVP 460
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPGH 439
V K G RG+ GS GPQG G GH
Sbjct: 414 VSKMEGPMGPRGYNGSIGPQGLAGAEGH 441
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KGDKG G +G G G +G GDQG G
Sbjct: 252 GPKGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQG 285
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G KGD+G G +GF G G +G G QG G+
Sbjct: 255 GDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKGL 289
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
+G KG G KG G GIQG GD+G G
Sbjct: 251 RGPKGDKGDKGDRGDQGIQGFKGDKGDKG 279
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQG 588
G + G +GD+G G KG G G QG+ G +G
Sbjct: 249 GLRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQGAKG 288
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 34.7 bits (76), Expect = 0.058
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 389 GFPGSPGPQGPRGLPG 436
G PG PGP GPRG+PG
Sbjct: 505 GLPGPPGPAGPRGIPG 520
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRG--LPG 436
+G+RG PG GP GP G +PG
Sbjct: 473 RGDRGPPGPAGPPGPSGRYVPG 494
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G + ++ G G G G +GF+G G+QG+PG G G P
Sbjct: 529 GRQGASGPPGIPGLNGTVGPRGPQGFSGPRGLQGTPGQNGLQGPP 573
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 484 NRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
N + G +G G G +G G+ G+QG PG QG G+
Sbjct: 543 NGTVGPRGPQGFSGPRGLQGTPGQNGLQGPPGPQGPMGV 581
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G+ +G +G G +G AG G QG+ G G PG+
Sbjct: 508 GTPGIQGPQGLPGKQGPAGPQGRQGASGPPGIPGL 542
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = +2
Query: 344 PGCC-VPKCFAE---KGNRGFPGSPGPQGPRGLPG 436
PG C V C +G +G PG GP GP+G G
Sbjct: 498 PGLCNVDVCKGTPGIQGPQGLPGKQGPAGPQGRQG 532
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGL 430
G G G PGPQGP G+
Sbjct: 565 GQNGLQGPPGPQGPMGV 581
>SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 505 WSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
+S G +G G+ G GR G+ G PG G G+P
Sbjct: 119 YSTGPRGPAGSPGMPGRNGLDGRPGMDGPMGMP 151
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
+G++G G KG G G+QG PG +G G
Sbjct: 181 QGERGPIGPKGLMGDKGVQGLPGPKGDRG 209
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G G G G +GSPG G PG P
Sbjct: 143 GMDGPMGMPGRDGTNGKEGSPGPPGAPGPP 172
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
++G+ G PG+PGP G GL G
Sbjct: 159 KEGSPGPPGAPGPPGVNGLQG 179
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+KG +G PG G +GP GL G
Sbjct: 195 DKGVQGLPGPKGDRGPTGLSG 215
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G N G G G G G G+ G G PG G PG+
Sbjct: 131 GMPGRNGLDGRPGMDGPMGMPGRDGTNGKEGSPGPPGAPGPPGV 174
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G G PG GP G+PG
Sbjct: 134 GRNGLDGRPGMDGPMGMPG 152
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 463 T*GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
T G + S G+ G G G +G G +G +G GD+G G+P
Sbjct: 156 TNGKEGSPGPPGAPGPPGVNGLQGLQGERGPIGPKGLMGDKGVQGLP 202
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GDKG G G G G G G+ G PG
Sbjct: 194 GDKGVQGLPGPKGDRGPTGLSGENGEPG 221
>SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 376
Score = 34.7 bits (76), Expect = 0.058
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 475 KRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
+R ++++GST +G G G G +G G QG PG +G G
Sbjct: 196 QRLSQASGSTGPRGYNGSRGPPGPSGPQGQQGPPGTKGPQG 236
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +2
Query: 323 INRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
+ R A G P+ + G+RG PG GPQG +G PG
Sbjct: 195 VQRLSQASGSTGPRGY--NGSRGPPGPSGPQGQQGPPG 230
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 344 PGCCVPKCF-AEKGNRGFPGSPGPQGPRGLPG 436
PG P+ F +G+ G G GPQGP G G
Sbjct: 229 PGTKGPQGFMGPRGHNGTAGQQGPQGPPGPKG 260
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G S+ G KG+KGKTG KG +G G G G +G G
Sbjct: 197 GIPGSHGIPGRIGIKGEKGKTGRKGDSGMKGDDGKIGQKGDRG 239
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMG---IQGSPGDQGRPGIP 603
KGD G G G GR G IQG G++G GIP
Sbjct: 166 KGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIP 199
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G G +G G G+QG PG G PG
Sbjct: 179 GRRGPRGIQGRKGNRGVQGIPGSHGIPG 206
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 34.3 bits (75), Expect = 0.077
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
KG G G GF G G QG PG G PG P
Sbjct: 1072 KGPPGPPGYPGFKGYRGPQGPPGIAGEPGPP 1102
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G S GD+G+TG G G G G+PG G PG
Sbjct: 1037 GPPGSPGDRGQTGVPGPVGPDGDIGAPGADGVPG 1070
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 523 GKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G G G GSPGD+G+ G+P
Sbjct: 1025 GLMGRSGPVGPPGPPGSPGDRGQTGVP 1051
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GA ++ G G G G KG+ G G G G+ G PGI
Sbjct: 1061 GAPGADGVPGPKGPPGPPGYPGFKGYRGPQGPPGIAGEPGPPGI 1104
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ TG G G GA G G G +G PG G PG
Sbjct: 1040 GSPGDRGQTGVPGPVGPDGDIGAPGADGVPGPKGPPGPPGYPG 1082
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGS---PGPQGPRGLPGH 439
VP G+ G PG+ PGP+GP G PG+
Sbjct: 1050 VPGPVGPDGDIGAPGADGVPGPKGPPGPPGY 1080
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 341 APGCC-VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
APG VP G G+PG G +GP+G PG
Sbjct: 1062 APGADGVPGPKGPPGPPGYPGFKGYRGPQGPPG 1094
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PGSPG +G G+PG
Sbjct: 1034 GPPGPPGSPGDRGQTGVPG 1052
>SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013)
Length = 496
Score = 34.3 bits (75), Expect = 0.077
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQG 588
GS KGD+G G G G G QGS GDQG
Sbjct: 374 GSQGPKGDQGVQGPVGPQGYNGTQGSKGDQG 404
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 356 VPKCFAEKGNRGFPGSPGPQGPRGLPG 436
V K G RG+ GS GP+G +G+ G
Sbjct: 360 VSKVEGPMGPRGYNGSQGPKGDQGVQG 386
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 386 RGFPGSPGPQGPRGLPG 436
RG PG PGPQGP+G PG
Sbjct: 121 RGPPGPPGPQGPKGDPG 137
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
+G G G +G G G++G GD+G PG+
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGDRGIPGV 150
>SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022)
Length = 94
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GS KGD+G G G G G QG GDQG G+
Sbjct: 47 GSQGPKGDQGVQGPIGPQGYNGTQGPKGDQGVKGV 81
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 311 TSTAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
T + IN +A V K G RG+ GS GP+G +G+ G
Sbjct: 18 TVSDINSTLSAKIDSVSKMEGPMGPRGYNGSQGPKGDQGVQG 59
>SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04)
Length = 181
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 386 RGFPGSPGPQGPRGLPG 436
RG PG PGPQGP+G PG
Sbjct: 121 RGPPGPPGPQGPKGDPG 137
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
+G G G +G G G++G GD+G PG+
Sbjct: 121 RGPPGPPGPQGPKGDPGVRGEKGDRGIPGV 150
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGR-----PGIP 603
G +G KG G++G +G G G+PG +GR PGIP
Sbjct: 48 GPPGPQGTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIP 88
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G G G +G G G +G PG QG PGI
Sbjct: 83 GPPGIPGPRGLPGYRGPKGPPGYQGMPGI 111
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 386 RGFPGSPGPQGPRGLPGH 439
R PG PG GPRGLPG+
Sbjct: 79 RSPPGPPGIPGPRGLPGY 96
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
Frame = +2
Query: 380 GNRGFPGSPGPQG--PRGLPG 436
G +G+PG+PGP+G P G PG
Sbjct: 66 GVQGYPGAPGPRGRSPPGPPG 86
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 478 RSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
R G G +G G +G G G QG PG G PG
Sbjct: 77 RGRSPPGPPGIPGPRGLPGYRGPKGPPGYQGMPGIAGAPG 116
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 386 RGFPGSPGPQGPRGLPG 436
RG G PGPQG +G PG
Sbjct: 44 RGTEGPPGPQGTKGPPG 60
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 344 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
PG PK G +G PG G GPRG PG
Sbjct: 94 PGYRGPK--GPPGYQGMPGIAGAPGPRGPPG 122
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G RG PG GP+GP G G
Sbjct: 89 GPRGLPGYRGPKGPPGYQG 107
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 344 PGCCVPKCFAEKGNRGFPGS---PGPQGPRGLPGH 439
PG P+ + G G PG PG +GP+G PG+
Sbjct: 71 PGAPGPRGRSPPGPPGIPGPRGLPGYRGPKGPPGY 105
>SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29)
Length = 407
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G T +G+ G GA+G G G+QG G QG+ G P
Sbjct: 19 GITGPQGETGSDGAQGAPGEGGLQGPIGLQGQRGPP 54
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G++ + G G KG G G G G G+PG G PG
Sbjct: 354 GSRGTKGEAGPPGPNGPKGNVGPAGQVGNNGQDGTPGKDGVPG 396
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
TGS ++G G+ G +G G G +G PG +G GI
Sbjct: 27 TGSDGAQGAPGEGGLQGPIGLQGQRGPPGPKGSRGI 62
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
GS +KG+ G G G G +G G G+ G+ G P
Sbjct: 354 GSRGTKGEAGPPGPNGPKGNVGPAGQVGNNGQDGTP 389
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G++ G KGD G G G G G G PG G G
Sbjct: 330 GSQGEQGPQGPVGMKGDNGPQGGAGSRGTKGEAGPPGPNGPKG 372
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + ++G G +G TG +G G G QG+PG+ G G
Sbjct: 1 GPRGIKGASGLQGGPGLQGITGPQGETGSDGAQGAPGEGGLQG 43
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG+RG G GP GP G G
Sbjct: 57 KGSRGIAGEAGPDGPAGPAG 76
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G +G G PGP GP+G G
Sbjct: 356 RGTKGEAGPPGPNGPKGNVG 375
>SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09)
Length = 386
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = +1
Query: 487 RSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQG 588
R G+ SKGD+G G KG G G QG G QG
Sbjct: 321 RYNGTQGSKGDQGVQGVKGDQGVPGPQGPKGAQG 354
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
GS KGD+G G G G QGS GDQG G+
Sbjct: 303 GSQGPKGDQGVQGPIGPQRYNGTQGSKGDQGVQGV 337
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + G +G G G+QG GDQG PG
Sbjct: 318 GPQRYNGTQGSKGDQGVQGVKGDQGVPG 345
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 311 TSTAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
T + IN +A V K G RG+ GS GP+G +G+ G
Sbjct: 274 TVSDINSTLSAKIDSVSKMEGPIGPRGYNGSQGPKGDQGVQG 315
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G +G G PGPQGP+G G
Sbjct: 335 QGVKGDQGVPGPQGPKGAQG 354
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G +G G G G +G G PGD G PG+P
Sbjct: 256 GPQGPNGLPGPNGILGPPGPPGDMGPPGLP 285
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G +G G G G +G G PGD G PG+P
Sbjct: 171 GIQGPNGLPGPNGPLGPPGPPGDMGPPGLP 200
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G GFPG GP GP+G PG
Sbjct: 49 GPPGFPGPQGPNGPKGPPG 67
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQ---GPRGLPG 436
P + G G PG PGPQ GP GLPG
Sbjct: 358 PGPLGDVGPPGLPGPPGPQMPPGPPGLPG 386
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQ---GPRGLPG 436
P + G G PG PGPQ GP GLPG
Sbjct: 443 PGPLGDVGPPGLPGPPGPQMPPGPPGLPG 471
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQ---GPRGLPG 436
P + G G PG PGPQ GP GLPG
Sbjct: 528 PGPLGDVGPPGLPGPPGPQMPPGPPGLPG 556
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G+ G PG PGPQGP+ PG
Sbjct: 192 GDMGPPGLPGPQGPQMPPG 210
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQ---GPRGLPG 436
+ G G PG PGPQ GP GLPG
Sbjct: 278 DMGPPGLPGPPGPQMPPGPPGLPG 301
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PGP GP G+ G
Sbjct: 465 GPPGLPGAPGPNGPPGING 483
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PGP GP G+ G
Sbjct: 550 GPPGLPGAPGPNGPPGING 568
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPGH 439
KG G PG PGP G +G PG+
Sbjct: 63 KGPPGLPGPPGPPGFQGPPGN 83
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+GN G P GPQGP GLPG
Sbjct: 248 QGNHGNPA--GPQGPNGLPG 265
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E G+ G PG PGP GP+ PG
Sbjct: 105 ELGDMGPPGPPGPPGPQMPPG 125
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PGP+GP G G
Sbjct: 210 GPPGLPGAPGPKGPPGTNG 228
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PGP+GP G G
Sbjct: 295 GPPGLPGAPGPKGPPGTNG 313
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PGP+GP G G
Sbjct: 380 GPPGLPGAPGPKGPPGTNG 398
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 395 PGSPGPQGPRGLPG 436
PG PGP GP G PG
Sbjct: 42 PGPPGPDGPPGFPG 55
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQ---GPRGLPG 436
P + G G PG PGPQ GP GLPG
Sbjct: 103 PGELGDMGPPGPPGPPGPQMPPGPPGLPG 131
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PG GP GLPG
Sbjct: 183 GPLGPPGPPGDMGPPGLPG 201
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 395 PGSPGPQGPRGLPG 436
PG PGP GP+G PG
Sbjct: 637 PGPPGPPGPKGPPG 650
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 395 PGSPGPQGPRGLPG 436
PG PGP GP+G PG
Sbjct: 807 PGPPGPPGPKGPPG 820
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 395 PGSPGPQGPRGLPG 436
PG PGP GP+G PG
Sbjct: 892 PGPPGPPGPKGPPG 905
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PGPQGP G G
Sbjct: 46 GPDGPPGFPGPQGPNGPKG 64
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PG GP GLPG
Sbjct: 268 GILGPPGPPGDMGPPGLPG 286
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G +G PG PGP GP G G
Sbjct: 61 GPKGPPGLPGPPGPPGFQG 79
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 389 GFPGSPGPQGPRGLPG 436
G PG PGP GP G PG
Sbjct: 125 GPPGLPGPPGPAGPPG 140
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + G KG G G G G G PG+ G PG
Sbjct: 213 GLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPG 246
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + G KG G G G G G PG+ G PG
Sbjct: 298 GLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPG 331
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G + G KG G G G G G PG+ G PG
Sbjct: 383 GLPGAPGPKGPPGTNGPLGPPGDVGPPGNPGGPG 416
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P E G G PG PGP P PG
Sbjct: 698 PGQIGEMGPPGLPGPPGPASPPSPPG 723
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 395 PGSPGPQGPRGLPG 436
PG PGP GP G PG
Sbjct: 722 PGPPGPPGPNGPPG 735
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PGP GP G G
Sbjct: 125 GPPGLPGPPGPAGPPGTNG 143
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G G PG GP GP G PG
Sbjct: 173 QGPNGLPGPNGPLGPPGPPG 192
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G G G G Q PG G PG P
Sbjct: 189 GPPGDMGPPGLPGPQGPQMPPGPPGLPGAP 218
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G+ G PG PGP GP+ PG
Sbjct: 277 GDMGPPGLPGPPGPQMPPG 295
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P E G G PG PGP P PG
Sbjct: 783 PGQVGEMGPPGLPGPPGPASPPSPPG 808
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P E G G PG PGP P PG
Sbjct: 868 PGQVGEMGPPGLPGPPGPASPPSPPG 893
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P E G G PG PGP P PG
Sbjct: 613 PGEIGEIGPAGLPGPPGPASPPSPPG 638
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGR----MGIQGSPGDQGRPGI 600
G N G G G G G+ G G+QG G G PGI
Sbjct: 647 GPPGPNGPLGPPGESGPAGNAGGVGYQGNHGNPAGVQGPNGQPGPPGI 694
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GD+G G G G G +G GD+G+PG
Sbjct: 186 GDRGPQGIPGDMGPRGAKGDKGDRGKPG 213
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG PGPQGP+G PG
Sbjct: 1823 GLDGPPGPPGPQGPKGWPG 1841
Score = 31.1 bits (67), Expect = 0.72
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 395 PGSPGPQGPRGLPG 436
PG PGP GP GLPG
Sbjct: 1670 PGPPGPDGPMGLPG 1683
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG GPQGP+G+PG
Sbjct: 1780 GVDGPPGLAGPQGPKGMPG 1798
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPGH 439
G +G PG PG GP+G+PG+
Sbjct: 1689 GPKGPPGPPGLPGPQGIPGY 1708
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG GP GP+G PG
Sbjct: 1677 GPMGLPGPQGPDGPKGPPG 1695
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG G PG PGPQG G PG
Sbjct: 1691 KGPPGPPGLPGPQGIPGYPG 1710
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 359 PKCFAEKGNRGFPGSPGPQGPRGLPG 436
P +G +G PG PGP GP G G
Sbjct: 1785 PGLAGPQGPKGMPGPPGPPGPPGAIG 1810
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G +G+PG PGP GP G G
Sbjct: 1834 QGPKGWPGVPGPPGPPGAYG 1853
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G G+ G G G G QG PGD G G
Sbjct: 1714 GPPGRDGPMGPPGPSGGQGPPGDMGSMG 1741
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+ + G G G G G G+ G PG G PG
Sbjct: 1774 GTQGASGVDGPPGLAGPQGPKGMPGPPGPPGPPG 1807
>SB_800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 599 IPGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVD 489
+P P P DP P +P++P P +P P D P D
Sbjct: 424 VPSDPTVPSDPTDPTVPSDPTDPTVPSDPTDPTVPSD 460
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 599 IPGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDP 495
+P P P DP +P P +P P P P D DP
Sbjct: 403 VPSDPTVPSDPTVPSDPTDPTVPSDPTVPSDPTDP 437
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 599 IPGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVD 489
+P P P DP P +P++P P P P DP D
Sbjct: 409 VPSDPTVPSDPTDPTVPSDPTVPSDPTDPTVPSDPTD 445
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 599 IPGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVD 489
+P P P DP +P P P P +P P D P D
Sbjct: 391 VPSDPTVPSDPTVPSDPTVPSDPTVPSDPTDPTVPSD 427
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVD 489
P P P DP +P P +P P P P DP D
Sbjct: 419 PTDPTVPSDPTVPSDPTDPTVPSDPTDPTVPSDPTD 454
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -2
Query: 587 PWSPGDP*IPILPANPFAPVLPLSPLDHVDPVD 489
P P DP +P P P P +P P DP D
Sbjct: 389 PTVPSDPTVPSDPTVPSDPTVPSDPTVPSDPTD 421
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P GP P P P GP PS P+
Sbjct: 470 PSGPAVPTGPTVPSGPTVPSGPT 492
>SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G T +KGD+G G +G+ G G +G+ G G G
Sbjct: 218 GDTGNKGDQGVQGLRGYNGTQGPRGNTGIMGPQG 251
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G + +TG +G KG TG G G G G+ GDQG G+
Sbjct: 236 GTQGPRGNTGIMGPQGPKGDTGITGPKGPKGDTGNKGDQGVQGL 279
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPG 579
G T +KGD+G G +G+ G G +G G
Sbjct: 266 GDTGNKGDQGVQGLRGYNGTQGAKGEAG 293
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGD---KGKTGAKGFAGRMGIQGSPGDQG 588
G K TG KGD KG G +G G G QG+ G+ G
Sbjct: 251 GPKGDTGITGPKGPKGDTGNKGDQGVQGLRGYNGTQGAKGEAG 293
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G+T G KG G G G G+QG G G G
Sbjct: 206 GNTGIMGPKGPKGDTGNKGDQGVQGLRGYNGTQG 239
>SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
GS KGD+G G G G G QG GDQG G
Sbjct: 831 GSQGPKGDQGVQGPIGPQGYNGTQGPKGDQGIQG 864
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 311 TSTAINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
T T IN A V K G RGF GS GP+G +G+ G
Sbjct: 802 TVTNINSTLYAKIDAVSKMEGPMGPRGFNGSQGPKGDQGVQG 843
>SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45)
Length = 577
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G KG+ G G +G GR G+QG G +G G
Sbjct: 200 GEKGLKGETGPIGGQGLEGRTGVQGDDGIRGPQG 233
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQG------SPGDQGRPGIP 603
G + ++ G + KG G G KG AGR+G +G S GD G PG P
Sbjct: 284 GIRGASGPIGDSGIKGGYGLMGEKGTAGRLGERGKKGPFGSIGDMGPPGEP 334
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G K G + G G+ G KG G +G G PG+ G+PG
Sbjct: 296 GIKGGYGLMGEKGTAGRLGERGKKGPFGSIGDMGPPGEPGKPG 338
Score = 31.9 bits (69), Expect = 0.41
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPG---DQGRPG 597
G +G++G G KG G MG +G PG + G+PG
Sbjct: 29 GLQGDRGEQGPFGPKGAGGEMGSKGPPGVPGEVGKPG 65
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQG 588
G G KG GAKG R+G+QG G+QG
Sbjct: 11 GKPGVSGTKGNIGAKG---RIGLQGDRGEQG 38
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 493 TGSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
TG G +G G +G G G G PG G PG
Sbjct: 220 TGVQGDDGIRGPQGKQGGVGPTGGHGPPGPMGEPG 254
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 32.3 bits (70), Expect = 0.31
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 12/47 (25%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAG------------RMGIQGSPGDQGRPGI 600
G T GD G TG GF G G+ G+PGD GRPG+
Sbjct: 121 GPTGPAGDPGMTGVPGFPGINAIPGEGGLPGGNGLPGNPGDPGRPGL 167
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQ-GRPG 597
G +G+KG+ GAK G G+QG+ DQ G PG
Sbjct: 24 GPAAMEGNKGELGAK---GEKGLQGNTPDQPGPPG 55
>SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 111
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMG---IQGSPGDQGRPGIP 603
KGD G G G GR G IQG G++G GIP
Sbjct: 44 KGDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIP 77
Score = 32.3 bits (70), Expect = 0.31
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
G +G G +G G G+QG PG G PG
Sbjct: 57 GRRGPRGIQGRKGNRGVQGIPGSHGIPG 84
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMG 561
G S+ G KG+KGKTG KG +G G
Sbjct: 75 GIPGSHGIPGRIGIKGEKGKTGRKGDSGMKG 105
>SB_26852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G G +G GA G GR+G +G PG +G G+
Sbjct: 80 GRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSGV 114
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G G G PG +GP+G PG
Sbjct: 76 RGRDGRDGKPGLRGPKGAPG 95
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 344 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
PG PK G RG G+ GP GPRG G
Sbjct: 85 PGLRGPK--GAPGGRGRIGARGPPGPRGSSG 113
>SB_17480| Best HMM Match : Collagen (HMM E-Value=0.00078)
Length = 102
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G G +G GA G GR+G +G PG +G G+
Sbjct: 4 GRDGKPGLRGPKGAPGGRGRIGARGPPGPRGSSGV 38
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 344 PGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
PG PK G RG G+ GP GPRG G
Sbjct: 9 PGLRGPK--GAPGGRGRIGARGPPGPRGSSG 37
>SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07)
Length = 232
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 463 T*GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPG 579
T G ++ G + G KG G KG G G+QG PG
Sbjct: 51 TPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PGP+GP G G
Sbjct: 59 GRNGKPGAPGPKGPPGPKG 77
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 341 APGCCVPKCF-AEKGNRGFPGSPGPQGPRGLPG 436
AP C C G G PG PG G G PG
Sbjct: 21 APSPCQNCCAQGHDGKNGIPGDPGVPGQLGTPG 53
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+ GN G G PG GP+G PG
Sbjct: 54 KSGNDGRNGKPGAPGPKGPPG 74
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G G G G G G G G+ G G+PG P
Sbjct: 32 GHDGKNGIPGDPGVPGQLGTPGKSGNDGRNGKPGAP 67
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 463 T*GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPG 579
T G ++ G + G KG G KG G G+QG PG
Sbjct: 51 TPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 535 AKGFAGRMGIQGSPGDQGRPGIP 603
A+G G+ GI G PG G+PG P
Sbjct: 30 AQGHDGKNGIPGIPGVPGKPGTP 52
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PGP+GP G G
Sbjct: 59 GRNGKPGAPGPKGPPGPKG 77
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+ GN G G PG GP+G PG
Sbjct: 54 KSGNDGRNGKPGAPGPKGPPG 74
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 341 APGCCVPKCF-AEKGNRGFPGSPGPQGPRGLPG 436
AP C C G G PG PG G G PG
Sbjct: 21 APSPCQNCCAQGHDGKNGIPGIPGVPGKPGTPG 53
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 463 T*GAKRSNRSTGSTWSKGDKGKTGAKGFAGRMGIQGSPG 579
T G ++ G + G KG G KG G G+QG PG
Sbjct: 51 TPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGPPG 89
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 535 AKGFAGRMGIQGSPGDQGRPGIP 603
A+G G+ GI G PG G+PG P
Sbjct: 30 AQGHDGKNGIPGIPGVHGKPGTP 52
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G PG+PGP+GP G G
Sbjct: 59 GRNGKPGAPGPKGPPGPKG 77
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 341 APGCCVPKCF-AEKGNRGFPGSPGPQGPRGLPG 436
AP C C G G PG PG G G PG
Sbjct: 21 APSPCQNCCAQGHDGKNGIPGIPGVHGKPGTPG 53
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
+ GN G G PG GP+G PG
Sbjct: 54 KSGNDGRNGKPGAPGPKGPPG 74
>SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 532 GAKGFAGRMGIQGSPGDQGRPG 597
GAKG G G +G+PG +GRPG
Sbjct: 242 GAKGAQGAQGPKGNPGLRGRPG 263
>SB_10732| Best HMM Match : Collagen (HMM E-Value=0.029)
Length = 367
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
KGDK G +G G G +G GDQG G+
Sbjct: 107 KGDKCDKGDQGIQGVKGDKGDKGDQGAQGV 136
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRP 594
G KGD+G G KG G G QG+ G +G P
Sbjct: 108 GDKCDKGDQGIQGVKGDKGDKGDQGAQGVKGDP 140
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQGSPGDQGRPG 597
KG+KG KG G G++G GD+G G
Sbjct: 104 KGEKGDKCDKGDQGIQGVKGDKGDKGDQG 132
>SB_55304| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 853
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFD 480
P P P DP +P P P P P+ P DP D
Sbjct: 274 PSDPTGPSDPTVPSDPTGPSDPTGPIDPTGQSDPTGRSD 312
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -2
Query: 599 IPGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
+P P P DP P P P P P P DP D AP
Sbjct: 513 VPSDPTGPSDPTAPSDPTGPSDPTAPSDPTVSSDPTGPSDPTAP 556
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P +P DP +P P P P P P DP D P
Sbjct: 244 PSDPTAPSDPTVPSDPTGPSDPTAPSDPTAPSDPTGPSDPTVP 286
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P P DP P P P P +P P DP D AP
Sbjct: 334 PSDPTGPSDPTAPSDPTAPSDPTVPSDPTGPSDPTGPSDPTAP 376
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = -2
Query: 599 IPGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFD 480
+P P P DP P P P P +P P DP D
Sbjct: 441 VPSDPTGPSDPTAPSDPTAPSDPTVPSDPTGQSDPTGRSD 480
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P P DP P P P P +P P DP D AP
Sbjct: 232 PSDPTGPSDPTAPSDPTAPSDPTVPSDPTGPSDPTAPSDPTAP 274
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFD 480
P P +P DP P P P P +P P DP D
Sbjct: 262 PSDPTAPSDPTAPSDPTGPSDPTVPSDPTGPSDPTGPID 300
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDP 495
P P +P DP +P P P P P P DP
Sbjct: 430 PSDPTAPSDPTVPSDPTGPSDPTAPSDPTAPSDP 463
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDP 495
P P P DP +P P P P P P DP
Sbjct: 502 PSDPTGPNDPTVPSDPTGPSDPTAPSDPTGPSDP 535
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -2
Query: 599 IPGLPWSPGDP*I---PILPANPFAPVLPLSPLDHVDPVD 489
+P P +P DP + P P++P P P +P D P D
Sbjct: 27 VPSDPTAPSDPTVSSDPTAPSDPTGPSDPTAPSDPTAPSD 66
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P P DP P P P P P P DP D AP
Sbjct: 208 PSDPTGPSDPTGPSDPTGPSDPTAPSDPTGPSDPTAPSDPTAP 250
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P +P DP +P P P P P P DP D P
Sbjct: 346 PSDPTAPSDPTVPSDPTGPSDPTGPSDPTAPSDPTAPSDPTVP 388
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDP 495
P P P DP P P P P +P P DP
Sbjct: 364 PSDPTGPSDPTAPSDPTAPSDPTVPSDPTGQSDP 397
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDP 495
P P +P DP +P P P P P H DP
Sbjct: 376 PSDPTAPSDPTVPSDPTGQSDPTGPSDPTVHSDP 409
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P P DP P P P P +P P DP D P
Sbjct: 490 PSDPTGPSDPTAPSDPTGPNDPTVPSDPTGPSDPTAPSDPTGP 532
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P P DP +P P P P P P DP D P
Sbjct: 10 PSDPTGPSDPTVPSDPTVPSDPTAPSDPTVSSDPTAPSDPTGP 52
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P P DP +P P P P P DP D AP
Sbjct: 112 PSDPTGPSDPTVPSDPTGQSDPTAPSDPTAPSDPTGPSDPTAP 154
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P GP P P P GP P+APS
Sbjct: 211 PTGPSDPTGPSDPTGPSDPTAPS 233
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P GP P P P GP P+APS
Sbjct: 223 PTGPSDPTAPSDPTGPSDPTAPS 245
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P GP P P P GP P+APS
Sbjct: 325 PTGPSDPTGPSDPTGPSDPTAPS 347
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P GP P P P GP P+APS
Sbjct: 517 PTGPSDPTAPSDPTGPSDPTAPS 539
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P P DP P P P P +P P DP D P
Sbjct: 46 PSDPTGPSDPTAPSDPTAPSDPTVPSDPTAPSDPTAPSDPTGP 88
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P +P DP P P P P P P DP D AP
Sbjct: 226 PSDPTAPSDPTGPSDPTAPSDPTAPSDPTVPSDPTGPSDPTAP 268
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P +P DP P P P P P P DP D AP
Sbjct: 340 PSDPTAPSDPTAPSDPTVPSDPTGPSDPTGPSDPTAPSDPTAP 382
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P P DP +P P P P + P DP D AP
Sbjct: 16 PSDPTVPSDPTVPSDPTAPSDPTVSSDPTAPSDPTGPSDPTAP 58
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P P GP P P GP P+ PS
Sbjct: 142 PSDPTGPSDPTAPTGPSDPTGPS 164
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P P GP P P GP P+ PS
Sbjct: 187 PSDPTGPSDPTAPTGPSDPTGPS 209
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P P DP P P P P P P DP D AP
Sbjct: 202 PSDPTGPSDPTGPSDPTGPSDPTGPSDPTAPSDPTGPSDPTAP 244
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDP 495
P P P DP P P P P P P DP
Sbjct: 220 PSDPTGPSDPTAPSDPTGPSDPTAPSDPTAPSDP 253
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -2
Query: 599 IPGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
+P P P DP P P P P P P DP D P
Sbjct: 357 VPSDPTGPSDPTGPSDPTAPSDPTAPSDPTVPSDPTGQSDPTGP 400
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 587 PWSPGDP*IPILPANPFAPVLPLSPLDHVDPVDLFDLFAP 468
P P DP P P P P +P P DP D AP
Sbjct: 421 PTGPSDPTGPSDPTAPSDPTVPSDPTGPSDPTAPSDPTAP 460
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P GP P P P GP P+APS
Sbjct: 505 PTGPNDPTVPSDPTGPSDPTAPS 527
>SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06)
Length = 88
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 514 GDKGKTGAKGFAGRMGIQGSPGDQGRPGIP 603
G KG G G G G QG+PG +G G P
Sbjct: 10 GPKGDRGPIGPRGPQGYQGAPGPKGTGGFP 39
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG GFPG G +GPRG G
Sbjct: 33 KGTGGFPGEKGDEGPRGEDG 52
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G +G+ G+PGP+G G PG
Sbjct: 21 RGPQGYQGAPGPKGTGGFPG 40
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
KG+RG G GPQG +G PG
Sbjct: 12 KGDRGPIGPRGPQGYQGAPG 31
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPG 579
G T +KGD+G G +G+ G G +G G
Sbjct: 465 GDTGNKGDQGVQGLRGYNGTQGAKGEAG 492
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +1
Query: 469 GAKRSNRSTGSTWSKGD---KGKTGAKGFAGRMGIQGSPGDQG 588
G K TG KGD KG G +G G G QG+ G+ G
Sbjct: 450 GPKGDTGITGPQGPKGDTGNKGDQGVQGLRGYNGTQGAKGEAG 492
>SB_48755| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08)
Length = 421
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 516 TFRPRGPCGPI*PFCPLGPC 457
+F PR PCG + FCP G C
Sbjct: 368 SFEPRPPCGTVERFCPDGRC 387
>SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12)
Length = 567
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 353 CVPKCFAEKGNRGFPGSPGPQGPRGLPGH 439
C+ ++G RG G GPQG RG GH
Sbjct: 209 CIQGPKGDRGRRGPRGRQGPQGKRGPKGH 237
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
E+G +G PG GP GP+G PG
Sbjct: 255 ERGPQGPPGPKGPIGPKGEPG 275
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
++G RG G PGP+GP G G
Sbjct: 252 DRGERGPQGPPGPKGPIGPKG 272
>SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22)
Length = 767
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G RG+ G+ G GPRGLPG
Sbjct: 238 RGLRGYRGARGHTGPRGLPG 257
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2
Query: 398 GSPGPQGPRGLPGH 439
GSPGP+GPRGL G+
Sbjct: 230 GSPGPRGPRGLRGY 243
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLPLSPLDHVDP 495
P +P +P +P IP P N F P P +P H+ P
Sbjct: 285 PSIPLAPPNPYIPPAPPNLFIPSAPPNP--HIPP 316
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 596 PGLPWSPGDP*IPILPANPFAPVLP 522
P +P +P +P IP+ P NP+ P P
Sbjct: 277 PSIP-APPNPSIPLAPPNPYIPPAP 300
>SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05)
Length = 510
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +1
Query: 511 KGDKGKTGAKGFAGRMGIQ---GSPGDQGRPGI 600
KGDKG KG G G++ G GDQG G+
Sbjct: 349 KGDKGDKDDKGDQGMQGVKDEKGDKGDQGAQGV 381
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRG 427
KG RG PG+PG G RG
Sbjct: 245 KGERGPPGAPGAAGVRG 261
>SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035)
Length = 453
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G G G PGPQGP+GL G
Sbjct: 235 GMNGSKGVPGPQGPQGLEG 253
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G++G PG GPQG G PG
Sbjct: 238 GSKGVPGPQGPQGLEGPPG 256
>SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015)
Length = 391
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G G+PG PG +GP G PG
Sbjct: 80 RGPPGYPGIPGQKGPTGPPG 99
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRG 427
G GFPG GP GP+G
Sbjct: 112 GQSGFPGLHGPPGPKG 127
>SB_20784| Best HMM Match : Collagen (HMM E-Value=0.0036)
Length = 60
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G RG PG G QGPRG PG
Sbjct: 2 GARGPPGVTGAQGPRGPPG 20
>SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 496 GSTWSKGDKGKTGAKGFAGRMGIQGSPGDQGRPGI 600
G G+KG G G G +G +G GD G P +
Sbjct: 131 GKRGPPGEKGDQGIPGVKGDVGPKGEKGDSGGPEV 165
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
EKG++G PG G GP+G G
Sbjct: 138 EKGDQGIPGVKGDVGPKGEKG 158
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 532 GAKGFAGRMGIQGSPGDQGRPGI 600
G++G G+ G G GDQG PG+
Sbjct: 125 GSQGPPGKRGPPGEKGDQGIPGV 147
>SB_30187| Best HMM Match : ShlB (HMM E-Value=8.7)
Length = 538
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 541 GFAGRMGIQGSPGDQGRPG 597
G+ + G+QG PG+QG PG
Sbjct: 209 GYTFKQGLQGPPGEQGSPG 227
>SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
EKG+RG PG GP G G PG
Sbjct: 14 EKGSRGPPGPAGPIGNPGKPG 34
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G +G G PGP GP G PG
Sbjct: 13 GEKGSRGPPGPAGPIGNPG 31
>SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Frame = -2
Query: 602 GIP---GLPWSPGDP*---IPILPANPFAPVLPLS---PLDHVDPVDLFDLFAP*VLAHL 450
GIP LP +PG P +P+ P PF LPL+ P H P+ D+ + + A+L
Sbjct: 389 GIPFTHALPLTPGIPFTHALPLTPRIPFTHALPLTPRIPFTHALPLTPHDVMSEDIDAYL 448
Query: 449 QHLHGQE 429
Q+
Sbjct: 449 MQYQHQD 455
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Frame = -2
Query: 602 GIP---GLPWSPGDP*---IPILPANPFAPVLPLSP 513
GIP LP +PG P +P+ P PF LPL+P
Sbjct: 329 GIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTP 364
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Frame = -2
Query: 602 GIP---GLPWSPGDP*---IPILPANPFAPVLPLSP 513
GIP LP +PG P +P+ P PF LPL+P
Sbjct: 377 GIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTP 412
>SB_19778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 287 YDPDTRQRTSTAINRNCTAPGCCVPKCFAEKGN---RGFPGSPGPQGPRGLPGH 439
+ PD T+T T PG P KG RG+ G G GP+G PG+
Sbjct: 445 HGPDILIPTTTETPIVPTVPGPQPPIIVGSKGPDGLRGYRGPKGEPGPKGEPGY 498
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 523 GKTGAKGFAGRMGIQGSPGDQGRPG 597
G G G G G +G PG +G PG
Sbjct: 473 GSKGPDGLRGYRGPKGEPGPKGEPG 497
>SB_8660| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 1311
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAP 442
P GP GP+ P P+GP P P
Sbjct: 1120 PVGPVGPVGPVGPVGPVGPVGP 1141
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAP 442
P GP GP+ P P+GP P P
Sbjct: 1132 PVGPVGPVGPVDPVGPVGPVGP 1153
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAP 442
P GP GP+ P P+GP P P
Sbjct: 1135 PVGPVGPVDPVGPVGPVGPVGP 1156
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAP 442
P GP GP+ P P+GP P P
Sbjct: 1144 PVGPVGPVGPVGPVGPVGPVGP 1165
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAP 442
P GP GP+ P P+GP P P
Sbjct: 1147 PVGPVGPVGPVGPVGPVGPVGP 1168
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAP 442
P GP GP+ P P+GP P P
Sbjct: 1150 PVGPVGPVGPVGPVGPVGPVGP 1171
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAP 442
P GP GP+ P P+GP P P
Sbjct: 1123 PVGPVGPVGPVGPVGPVGPVDP 1144
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAP 442
P GP GP+ P P+GP P P
Sbjct: 1126 PVGPVGPVGPVGPVGPVDPVGP 1147
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSA 445
P GP GP+ P P+GP P A
Sbjct: 1153 PVGPVGPVGPVGPVGPVGPVA 1173
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 501 GPCGPI*PFCPLGPCAPSAP 442
GP GP+ P P+GP P P
Sbjct: 1119 GPVGPVGPVGPVGPVGPVGP 1138
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -1
Query: 555 STSKSFCSSFAFVTFRPRGPCGPI*PFCPLGPCAPSAP 442
ST K+ S P GP G + P P+GP P P
Sbjct: 1095 STKKTHALSGPLGPVGPVGPVGLVGPVGPVGPVGPVGP 1132
>SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024)
Length = 60
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G RG PG GP GP G+ G
Sbjct: 38 GQRGMPGGTGPPGPPGIIG 56
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -2
Query: 602 GIPGLPWSPGDP*IPILPANPFAPVLPLSP 513
G PG P +P P P P+ P P P +P
Sbjct: 510 GTPGTPSTPSTPSAPGTPSTPSTPSTPSTP 539
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 320 AINRNCTAPGCCVPKCFAEKGNRGFPGSPGPQGPRGLPG 436
A+N N PG P+ E+G +G PG G QGP+G G
Sbjct: 456 AVN-NSRIPGPRGPQ--GEQGLKGDPGPQGQQGPKGDQG 491
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 532 GAKGFAGRMGIQGSPGDQGRPG 597
G +G G G++G PG QG+ G
Sbjct: 464 GPRGPQGEQGLKGDPGPQGQQG 485
>SB_58047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 389 GFPGSPGPQGPRGLPG 436
G PG PGP GP G PG
Sbjct: 211 GPPGPPGPPGPPGPPG 226
>SB_55034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 101
Score = 28.3 bits (60), Expect = 5.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 206 YSVWSLRIWRHFTRPVSRRQIPG 138
Y R+WRH+T V+ ++PG
Sbjct: 79 YKATRSRVWRHYTAGVTYNEVPG 101
>SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 204
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G RG PG PGPQG G G
Sbjct: 183 QGMRGPPGPPGPQGSLGPAG 202
>SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 186
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRGLPG 436
+G RG PG PGPQG G G
Sbjct: 165 QGMRGPPGPPGPQGSLGPAG 184
>SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01)
Length = 738
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 526 KTGAKGFAGRMGIQGSPGDQGRPGI 600
K G G G G G PGD G PG+
Sbjct: 601 KEGLPGVNGTSGPPGPPGDMGPPGL 625
>SB_49500| Best HMM Match : Collagen (HMM E-Value=1.8e-07)
Length = 621
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P+GP GP P P GP P PS
Sbjct: 57 PQGPNGPQGPNGPQGPSGPQGPS 79
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P+GP GP P P GP P P+
Sbjct: 75 PQGPSGPQVPNGPQGPSGPQGPN 97
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 507 PRGPCGPI*PFCPLGPCAPSAPS 439
P+GP GP P P GP P P+
Sbjct: 63 PQGPNGPQGPSGPQGPSGPQVPN 85
>SB_41255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2
Query: 371 AEKGNRGFPGSPGPQGPRG 427
A G G PG PGPQGP G
Sbjct: 45 AAVGPPGPPGPPGPQGPAG 63
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 374 EKGNRGFPGSPGPQGPRGLPG 436
++G+ G PG PGP G RG G
Sbjct: 260 DRGDMGPPGHPGPPGVRGRRG 280
>SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048)
Length = 763
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 395 PGSPGPQGPRGLPG 436
PG GP GP+GLPG
Sbjct: 176 PGPQGPPGPQGLPG 189
>SB_14932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2
Query: 377 KGNRGFPGSPGPQGPRG 427
KG G PG PG QGP+G
Sbjct: 3 KGEPGPPGLPGEQGPQG 19
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRG 427
G+ G PG PGP GP G
Sbjct: 42 GDDGVPGQPGPPGPPG 57
>SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 348
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 380 GNRGFPGSPGPQGPRGLPG 436
G+RG PG GPQG RG G
Sbjct: 238 GSRGPPGIQGPQGERGPMG 256
>SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 303
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 510 RPRGPCGPI*PFCPLGPCAPSAPS 439
+P PC P P+ P PC P PS
Sbjct: 208 KPDIPCTPDKPYKPDRPCTPDEPS 231
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 317 TAINRNCTAPGCCVPKCFAE 376
TA+ R T+ CCVP+C +
Sbjct: 11 TAVRRRTTSFHCCVPRCIGD 30
>SB_55338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 532 GAKGFAGRMGIQGSPGDQGRPGI 600
G G G+MG QG PG G+ G+
Sbjct: 351 GRPGPQGKMGPQGDPGPAGKDGL 373
>SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1116
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -2
Query: 275 FALILVPS*LG-WYIVSIIQPILIYSVWSLRIWRHFTRPVSRRQ 147
F +++P+ W +VS+I P+++ VW + + TR V+R Q
Sbjct: 717 FVSLIIPTLASYWLLVSVILPVVML-VWYGKAFVRITREVTRLQ 759
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,032,170
Number of Sequences: 59808
Number of extensions: 442483
Number of successful extensions: 3710
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 1463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3468
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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