Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0817
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 126 2e-29
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 126 2e-29
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 126 2e-29
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 31 0.61
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 31 0.61
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 1.1
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 30 1.1
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 30 1.4
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 30 1.4
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 3.3
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily a... 28 5.7
U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical pr... 27 7.5
AL132904-18|CAC35853.1| 457|Caenorhabditis elegans Hypothetical... 27 7.5
Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 27 10.0
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 27 10.0
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 27 10.0
AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 27 10.0
AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe... 27 10.0
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 27 10.0
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 27 10.0
AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor typ... 27 10.0
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 126 bits (303), Expect = 2e-29
Identities = 53/81 (65%), Positives = 63/81 (77%)
Frame = +3
Query: 255 LITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWK 434
LI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYESY W
Sbjct: 271 LINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWT 330
Query: 435 KLDPSSEETKKLVQDYFSWNG 497
KLD S+ TKK V +Y W G
Sbjct: 331 KLDAKSDATKKEVNEYLMWEG 351
Score = 98.7 bits (235), Expect = 3e-21
Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = +1
Query: 76 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSC 252
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMSC
Sbjct: 210 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 269
Query: 253 NLL 261
NL+
Sbjct: 270 NLI 272
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 126 bits (303), Expect = 2e-29
Identities = 53/81 (65%), Positives = 63/81 (77%)
Frame = +3
Query: 255 LITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWK 434
LI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYESY W
Sbjct: 279 LINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWT 338
Query: 435 KLDPSSEETKKLVQDYFSWNG 497
KLD S+ TKK V +Y W G
Sbjct: 339 KLDAKSDATKKEVNEYLMWEG 359
Score = 98.7 bits (235), Expect = 3e-21
Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = +1
Query: 76 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSC 252
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMSC
Sbjct: 218 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 277
Query: 253 NLL 261
NL+
Sbjct: 278 NLI 280
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 126 bits (303), Expect = 2e-29
Identities = 53/81 (65%), Positives = 63/81 (77%)
Frame = +3
Query: 255 LITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWK 434
LI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYESY W
Sbjct: 304 LINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYESYTWT 363
Query: 435 KLDPSSEETKKLVQDYFSWNG 497
KLD S+ TKK V +Y W G
Sbjct: 364 KLDAKSDATKKEVNEYLMWEG 384
Score = 98.7 bits (235), Expect = 3e-21
Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 1/63 (1%)
Frame = +1
Query: 76 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMSC 252
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FMSC
Sbjct: 243 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 302
Query: 253 NLL 261
NL+
Sbjct: 303 NLI 305
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.61
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 379 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 269
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.61
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 379 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 269
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 387 PLSSDWQVDYESYDWKKL 440
PL D QVD+++Y+W+KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 109 DDFKRVYSNEDEAKSIPYFWEKFDPENYSIW-YAEYKYPEELAKVFMS 249
D+ V+ N+ + K P + KF PENY +W Y +E ++ ++S
Sbjct: 42 DELLAVF-NKFKGKKFPRKFPKFGPENYKVWCYVNELDKDETSEYYIS 88
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 382 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 269
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 382 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 269
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 355 CGCGAERSSCSRCRLIGRWTTSPTTG 432
C C + + CRL+ W+ TTG
Sbjct: 696 CSCNGDTTESENCRLLSSWSEWTTTG 721
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 5.7
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1
Query: 139 DEAKSIPYFWEKFDPENYSIWYAEY 213
D+ + +P WE+ D +NY +Y ++
Sbjct: 327 DDPRELPPGWEQVDDQNYGTFYVDH 351
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 286 KCANRLSHPSACLVKTTIPPSLECGCGAERSSCSRCRLIGRWTTSPTTG 432
KC+ + + + +P + CGC A S + CR R T S + G
Sbjct: 4 KCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGG 52
>AF125953-1|AAD14702.2| 397|Caenorhabditis elegans Temporarily
assigned gene nameprotein 304 protein.
Length = 397
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +3
Query: 411 DYESYDWKKL---DPSSEETKKLVQDYFSWNGTDKEVESSTR 527
D E D+K++ DP+ EE ++LV D+F +G + +E+ ++
Sbjct: 154 DVEFNDYKEVMRPDPTREELQQLVIDHFLHHGYSEVIETFSK 195
>U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical
protein M02B7.5 protein.
Length = 640
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 334 TIPPSLECGCGAERSSCSRCRLIGRWTTSPTTGRNWILRARRPRNLSRTTSRGTEP 501
TIP L+ CG S + L R+ TS + + I RA R L R+ P
Sbjct: 75 TIPDHLDARCGVSNSQRNELSLTSRYATS-LSAQLRIDRAARSTTLDRSPPSPAPP 129
>AL132904-18|CAC35853.1| 457|Caenorhabditis elegans Hypothetical
protein Y111B2A.24 protein.
Length = 457
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 498 TDKEVESSTRARYSSECRPTSSQCI 572
+D++V TR+R SS CR SSQ +
Sbjct: 99 SDRQVGRRTRSRSSSRCRAHSSQSL 123
>Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical
protein ZK896.8 protein.
Length = 1112
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 286 LSNLWNIPVISYSS 245
++ WNIP+ISYSS
Sbjct: 135 MATFWNIPIISYSS 148
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +1
Query: 76 FDSMPKGTFNMDDFKRVYSNEDEAKSIPYFWEKFD 180
++ +P G + FK + +E+E + P+ ++K D
Sbjct: 154 WEDLPDGWLTAETFKNKFYDEEEVTNNPFGYQKLD 188
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 432 KKLDPSSEETKKLVQDYFSWNGTDKEVESSTRARYSSECRPTSSQ 566
KK P S K F W+ TD E + TR R S + SS+
Sbjct: 479 KKKRPKSPNRSKKDSRAFGWDSTD-ESDEDTRRRRSGRSQNRSSE 522
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 432 KKLDPSSEETKKLVQDYFSWNGTDKEVESSTRARYSSECRPTSSQ 566
KK P S K F W+ TD E + TR R S + SS+
Sbjct: 479 KKKRPKSPNRSKKDSRAFGWDSTD-ESDEDTRRRRSGRSQNRSSE 522
>AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein
protein.
Length = 577
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 136 EDEAKSIPYFWEKF-DPENYSIWY 204
E+E K +P WEK DP+ YS ++
Sbjct: 141 EEEPKDLPPGWEKHEDPQGYSYYW 164
>AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform c protein.
Length = 554
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 136 EDEAKSIPYFWEKF-DPENYSIWY 204
E+E K +P WEK DP+ YS ++
Sbjct: 118 EEEPKDLPPGWEKHEDPQGYSYYW 141
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 136 EDEAKSIPYFWEKF-DPENYSIWY 204
E+E K +P WEK DP+ YS ++
Sbjct: 259 EEEPKDLPPGWEKHEDPQGYSYYW 282
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +1
Query: 136 EDEAKSIPYFWEKF-DPENYSIWY 204
E+E K +P WEK DP+ YS ++
Sbjct: 229 EEEPKDLPPGWEKHEDPQGYSYYW 252
>AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1113
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3
Query: 286 LSNLWNIPVISYSS 245
++ WNIP+ISYSS
Sbjct: 135 MATFWNIPIISYSS 148
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,871,218
Number of Sequences: 27780
Number of extensions: 309669
Number of successful extensions: 1194
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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