Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0817
         (591 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.0  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   3.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   3.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   6.8  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 390 LSSDWQVDYESYDWKKLDPSSEETKKL 470
           LSS+W  DY     +K  P S   +KL
Sbjct: 196 LSSEWDSDYTDKSNEKKIPKSSGWRKL 222


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 142 EAKSIPYFWEKFDPENYSIWYAEYKY 219
           + K+   + E   P NYS WY  + Y
Sbjct: 189 DTKTSGKYKEYIIPANYSGWYLNHDY 214


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 142 EAKSIPYFWEKFDPENYSIWYAEYKY 219
           + K+   + E   P NYS WY  + Y
Sbjct: 189 DTKTSGKYKEYIIPANYSGWYLNHDY 214


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +3

Query: 447 SSEETKKLVQDYFSWNGTDKEVESSTRARY 536
           S E  +KL+ D+F +   D+ ++++   R+
Sbjct: 173 SKETQQKLIDDHFLFKEGDRFLQAANACRF 202


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +3

Query: 447 SSEETKKLVQDYFSWNGTDKEVESSTRARY 536
           S E  +KL+ D+F +   D+ ++++   R+
Sbjct: 157 SKETQQKLIDDHFLFKEGDRFLQAANAXRF 186


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -1

Query: 399 QTTAGTRAPFRATPTLQRWWNCCLHQTGRRMRK 301
           + +AGT A F  + T+    NC    + RR  K
Sbjct: 624 RVSAGTPAAFNISTTIYENQNCLDASSSRRGSK 656


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,076
Number of Sequences: 438
Number of extensions: 3829
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)