Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0731
         (624 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical ...   133   1e-31
AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical ...   133   1e-31
Z30662-4|CAA83139.3|  376|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical ...    29   3.6  
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z81044-6|CAB02806.1|  360|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AF025459-4|AAB70984.2|  292|Caenorhabditis elegans Hypothetical ...    27   8.2  
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical...    27   8.2  

>AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8b protein.
          Length = 586

 Score =  133 bits (321), Expect = 1e-31
 Identities = 59/87 (67%), Positives = 71/87 (81%)
 Frame = +2

Query: 248 QGILHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTGKAITDVINI 427
           + +LH+ALRNR N+PILV+GKDV  DVN VL HMKEF ++++SG W GYTGK ITDV+NI
Sbjct: 130 RAVLHVALRNRANRPILVDGKDVMPDVNRVLAHMKEFCNEIISGSWTGYTGKKITDVVNI 189

Query: 428 GIGGSDVGPLMVTEALKPYANHLKVHF 508
           GIGGSD+GPLMVTE+LK Y     VHF
Sbjct: 190 GIGGSDLGPLMVTESLKNYQIGPNVHF 216



 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 42/79 (53%), Positives = 59/79 (74%)
 Frame = +3

Query: 18  NSTKIKMLQLFQQERERFEKNSLCIPTPNDGDILLDYSKNRINSDVFKLLLDLAKSRNVE 197
           N    ++L+LF+++  RFEK +    TP DGD L D+SKNRI  + F+LL+ LAKSR VE
Sbjct: 54  NEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSKNRITDESFQLLMRLAKSRGVE 112

Query: 198 QARDAMFAGQKINFTEDRA 254
           ++R+AMF+ +KINFTE+RA
Sbjct: 113 ESRNAMFSAEKINFTENRA 131



 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +1

Query: 505 FLSNIDGTHLAEVLKKLNPETALFIIASKTFTTQETITNA 624
           F+SN+DGTH+AEV KKLN ET LFIIASKTFTTQETITNA
Sbjct: 216 FVSNVDGTHVAEVTKKLNAETTLFIIASKTFTTQETITNA 255


>AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8a protein.
          Length = 551

 Score =  133 bits (321), Expect = 1e-31
 Identities = 59/87 (67%), Positives = 71/87 (81%)
 Frame = +2

Query: 248 QGILHIALRNRQNKPILVNGKDVSTDVNAVLEHMKEFSDQVVSGQWKGYTGKAITDVINI 427
           + +LH+ALRNR N+PILV+GKDV  DVN VL HMKEF ++++SG W GYTGK ITDV+NI
Sbjct: 95  RAVLHVALRNRANRPILVDGKDVMPDVNRVLAHMKEFCNEIISGSWTGYTGKKITDVVNI 154

Query: 428 GIGGSDVGPLMVTEALKPYANHLKVHF 508
           GIGGSD+GPLMVTE+LK Y     VHF
Sbjct: 155 GIGGSDLGPLMVTESLKNYQIGPNVHF 181



 Score = 88.2 bits (209), Expect = 4e-18
 Identities = 42/79 (53%), Positives = 59/79 (74%)
 Frame = +3

Query: 18  NSTKIKMLQLFQQERERFEKNSLCIPTPNDGDILLDYSKNRINSDVFKLLLDLAKSRNVE 197
           N    ++L+LF+++  RFEK +    TP DGD L D+SKNRI  + F+LL+ LAKSR VE
Sbjct: 19  NEKDAQLLELFEKDPARFEKFTRLFATP-DGDFLFDFSKNRITDESFQLLMRLAKSRGVE 77

Query: 198 QARDAMFAGQKINFTEDRA 254
           ++R+AMF+ +KINFTE+RA
Sbjct: 78  ESRNAMFSAEKINFTENRA 96



 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +1

Query: 505 FLSNIDGTHLAEVLKKLNPETALFIIASKTFTTQETITNA 624
           F+SN+DGTH+AEV KKLN ET LFIIASKTFTTQETITNA
Sbjct: 181 FVSNVDGTHVAEVTKKLNAETTLFIIASKTFTTQETITNA 220


>Z30662-4|CAA83139.3|  376|Caenorhabditis elegans Hypothetical
           protein T16H12.4 protein.
          Length = 376

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +1

Query: 4   NITMKTAQKLKCSNFSNKNGSVSKRTASV-SQHRTMETSYLTIPRTVSTV--MFLSCSSI 174
           + +++ A +L C+N     G VS+    V S   T++     I  T+ T+  M + CS+I
Sbjct: 146 DFSLQNALQLACANLKGMPGHVSREVVLVISALSTIDPG--NIYSTIETMKRMNIRCSAI 203

Query: 175 SLRAEMLNKPEM 210
            L AEM    EM
Sbjct: 204 GLSAEMFVCKEM 215


>AF067608-1|AAC17654.2|  544|Caenorhabditis elegans Hypothetical
           protein B0511.6 protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 148 VMFLSCSSISLRAEMLNKPEMPCSQVKR*TSQKTGHTAY 264
           V F SC+S+    E+LN  ++PC  +     Q+   T +
Sbjct: 319 VFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTF 357


>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
           protein K02F6.4 protein.
          Length = 1193

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 407 ITDVINIGIGGSDVGPLMVTEALKPYANHLKV 502
           +TD I    G  D+   ++T +LKP + HL +
Sbjct: 133 LTDAIGKVTGSFDISTSLITTSLKPVSEHLNL 164


>Z81044-6|CAB02806.1|  360|Caenorhabditis elegans Hypothetical
           protein C30H6.2 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 404 AITDVINIGIGGSDVGPLMVTEALKPYANHLKVHFYLTSTAPT 532
           ++T V  + +GG+ +GPLM  +     A H  +HF+L     T
Sbjct: 18  SVTVVSLLSLGGACIGPLMTKD-----AKHRWLHFFLAMAVST 55


>AF025459-4|AAB70984.2|  292|Caenorhabditis elegans Hypothetical
           protein H14A12.3 protein.
          Length = 292

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 275 NRQNKPILVNGKDVSTDVNAVLEHMK 352
           N+ N+ + +  KDV T + + LEH+K
Sbjct: 31  NKTNENLWIQRKDVDTTLRSALEHLK 56


>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
            protein Y47G6A.17 protein.
          Length = 1736

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 296  LVNGKDVSTDVNAVLEHMKEFSDQVVSGQWK 388
            +V   D   DV+  +E  KEF D+ V  +W+
Sbjct: 1227 IVKNDDEQDDVSERIERFKEFLDEEVQTEWE 1257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,467,419
Number of Sequences: 27780
Number of extensions: 297766
Number of successful extensions: 870
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)