Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0706
         (564 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKK6 Cluster: Putative uncharacterized protein; n=2; ...    33   4.6  
UniRef50_Q4E592 Cluster: Putative uncharacterized protein; n=1; ...    32   8.1  

>UniRef50_Q8IKK6 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 807

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = -1

Query: 336 FFGQTLKLNSHYLRGQFVASPYV--CLIQF*STSGGDGSMSNL--RFHYSLNDDHDNQYR 169
           +   T   N H +R + V +PYV  C+I+  +T   D  + NL  RF Y +N    + Y 
Sbjct: 500 YSNNTYSNNIHMMRKRMVGTPYVNKCIIKC-NTLKKDNKLHNLRKRFLYEINKYEYDSYN 558

Query: 168 LALETKIIKKCFFFH 124
           +    K+ K    F+
Sbjct: 559 IFTSEKVKKNPIHFY 573


>UniRef50_Q4E592 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 406

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
 Frame = +3

Query: 219 CSLIHH-RQRCFRTELNKRRERLRTGRVNNANSVLMFDQKT-DMPLACFVYR*TYSLTIN 392
           C  +H  RQ+    E++ RR   R+G +      LM ++ T D P A F    T SL+I 
Sbjct: 78  CDAVHFWRQKVNIAEISSRRREKRSGHIGGVARGLMQEEHTFDDPEAAFF---TPSLSIA 134

Query: 393 RAVTHIYSFKLA-YRNKGTPTN*VTPPFL*SENQV*NIRDVDASL-HSG 533
              T IY+  L  Y  +    +     FL    ++ + ++  ASL H G
Sbjct: 135 TGDTQIYAAPLENYSRENEAQHDELKTFLGETEELEDEKEAYASLFHEG 183


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,482,380
Number of Sequences: 1657284
Number of extensions: 8890195
Number of successful extensions: 15355
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15354
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37904934977
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)