Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0706
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   1.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   3.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   5.5  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   5.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.5  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = -1

Query: 480 TTKTGE*LNSSVFLYFDRQV*NYIYASQPD*SSESKFIDIQNRRGAYQFFGQTLKLNSHY 301
           TT T   LNS+  + F+    NY+Y       + S  ID+ N      F   +  +  +Y
Sbjct: 14  TTTTSSALNSTPLIEFNISTSNYLY-------TPSSTIDLYNTSSVSNFNESSSSVFPNY 66

Query: 300 LR 295
           +R
Sbjct: 67  IR 68


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = -1

Query: 480 TTKTGE*LNSSVFLYFDRQV*NYIYASQPD*SSESKFIDIQNRRGAYQFFGQTLKLNSHY 301
           TT T   LNS+  + F+    NY+Y       + S  ID+ N      F   +  +  +Y
Sbjct: 14  TTTTSSALNSTPLIEFNISTSNYLY-------TPSSTIDLYNTSSVSNFNESSSSVFPNY 66

Query: 300 LR 295
           +R
Sbjct: 67  IR 68


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 421 NLPIEIKEHRRIELLPRFCSRKIK 492
           NLP E  +  R  L P F S KIK
Sbjct: 78  NLPGEKWKEMRATLSPAFTSSKIK 101


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 249 FRTELNKRRERLRTGRVNNAN 311
           F  E  KRRE LR  +  NAN
Sbjct: 299 FSDESKKRRELLRLAQQVNAN 319


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 207 HYSLNDDHDNQY 172
           H  L DDHD +Y
Sbjct: 193 HTPLTDDHDEKY 204


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 538 WVPLCNDASTS 506
           W+PLCN  + S
Sbjct: 160 WIPLCNSVTFS 170


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 538 WVPLCNDASTS 506
           W+PLCN  + S
Sbjct: 393 WIPLCNSVTFS 403


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -3

Query: 538 WVPLCNDASTS 506
           W+PLCN  + S
Sbjct: 393 WIPLCNSVTFS 403


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,095
Number of Sequences: 336
Number of extensions: 2488
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)