Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0700
         (607 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0078 - 13147741-13148913                                         29   2.9  
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664...    29   3.8  
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047...    28   5.0  
04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414     28   5.0  
12_02_0854 + 23697826-23698033,23699111-23699276,23699430-236994...    28   6.6  
01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853     28   6.6  

>07_03_0078 - 13147741-13148913
          Length = 390

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 436 SGPAFSGLPRIFLAVSRVGFVSCATARF 519
           SGP + G  R+F+A+S +G ++ + A +
Sbjct: 223 SGPIYKGRERVFIAISDIGMLAVSLALY 250


>09_06_0328 +
           22365308-22365415,22365743-22366018,22366166-22366417,
           22366542-22366939,22367028-22368021,22368199-22368409,
           22368515-22368749,22368874-22368996,22369190-22369310,
           22369416-22369625
          Length = 975

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = +1

Query: 226 NWIRNFGIRMA---LRTGACRVWTGSGCGRCRVWSM 324
           +WIR+ G+++    ++ G  R  TG G  + R+WSM
Sbjct: 7   SWIRHEGLQIFSIDIQPGGIRFATGGGDQKIRIWSM 42


>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
            27505576-27507522,27508478-27508946,27509898-27510079,
            27510746-27511208,27511295-27511691,27511810-27511937,
            27512106-27512273,27512452-27512559,27512830-27512838
          Length = 1382

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -1

Query: 385  QFLRPHYIKILTR*NEHNARTSTRP-GTGRIRFPSKPDTPRSSEPSLFRSYGSNLPTSLT 209
            +++  H+IK L   NE +  TS RP GT R    +  D  R +E  L   YGSN    L 
Sbjct: 911  EYIIRHHIKELEALNEASFGTSRRPSGTER----ALNDPLRDNEGMLVDEYGSNTGFHLP 966

Query: 208  YII 200
             +I
Sbjct: 967  NLI 969


>04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414
          Length = 520

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 208 YIILSTRGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVSG 83
           + +L+ RG  P +PAA     RRD   ++P  + Q P    G
Sbjct: 28  HAVLAVRGPRPLQPAASASFRRRDRWFHLPLHDPQPPPAAEG 69


>12_02_0854 +
           23697826-23698033,23699111-23699276,23699430-23699466,
           23699531-23700145
          Length = 341

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -1

Query: 331 ARTSTRPGTGRIRFPSKPDTPRSSE 257
           A TST PG GR R PS P TP  S+
Sbjct: 16  AATSTDPGRGRKRPPS-PSTPTPSD 39


>01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853
          Length = 625

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = -3

Query: 161 GYGYEPARHLHVHPSPEFSRSAES-IRTPPQMRCSSRSEPYLPSI 30
           G+   P+ H    P P+      S  R PP  R S RSE   P +
Sbjct: 26  GFDVTPSPHAEPSPRPQLRHDNPSRSRVPPLERVSRRSEVVFPPL 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,126,391
Number of Sequences: 37544
Number of extensions: 408748
Number of successful extensions: 1472
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)