Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0647
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.1  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.4  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 215 NFQGPQRVSGHRRKC 171
           NF GP R++   R+C
Sbjct: 601 NFHGPHRLAARSRRC 615


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 215 NFQGPQRVSGHRRKC 171
           NF GP R++   R+C
Sbjct: 493 NFHGPHRLAARSRRC 507


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = -2

Query: 147 YLPSIGFHGTRSLRQNRNLFPDLSAASSGHFGLPRRTLVFKDVG 16
           Y  S+G +G      ++N +P +   SS  +         KD G
Sbjct: 3   YPRSVGVYGAPYPSTDQNPYPSIGVESSAFYSPLSNPYALKDAG 46


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = -2

Query: 228 HPSPEFSRSAESIRTPPQMRCSSRSE-----PYLPSIGFH 124
           HP    S+ + +   PPQ+  + R E     P +P + F+
Sbjct: 217 HPDSPNSKKSATPSPPPQLEVNERKENLTCQPAVPYVPFY 256


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = -2

Query: 441 NITHEHRPDPAP-AHPLPVQTRHAPVLRANPYS 346
           N++HE         HPL + + H  +L  NP S
Sbjct: 321 NMSHEELSAMVNRCHPLSLSSDHQAMLHHNPMS 353


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 427  TSTRPGTGASASRPNPT 377
            T+TRP T ++ +RP  T
Sbjct: 1061 TTTRPTTTSTTTRPTTT 1077



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/49 (22%), Positives = 23/49 (46%)
 Frame = +2

Query: 65  EEAAERSGKRFLFCLSDRVPWNPIEGRYGSEREEHRICGGVRILSADLE 211
           E  A+  G + +  +++   +   EG++  E  + R+C  V    A L+
Sbjct: 629 EYEAKEEGPKVVCYMTNWAFYRKAEGKFVPEHIDQRLCTHVVYAFASLD 677


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,050
Number of Sequences: 336
Number of extensions: 3538
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)