Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0647
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0630 - 20097672-20097772,20097983-20102012 33 0.14
10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297 31 0.57
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 31 0.99
02_05_1170 + 34663853-34663928,34664038-34664078,34664317-346643... 30 1.3
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 30 1.7
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729... 29 2.3
08_01_0578 + 5139324-5140190 29 3.0
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 29 3.0
01_01_0012 + 71903-72935,73468-73981,74619-76008 29 3.0
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111 29 4.0
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199... 29 4.0
02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385 29 4.0
11_08_0032 - 27807489-27807497,27807641-27807684,27808046-278081... 28 5.3
01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305 28 5.3
12_02_0877 - 23946449-23948284 28 7.0
05_04_0145 - 18391112-18392461,18392545-18392637 28 7.0
07_03_0078 - 13147741-13148913 27 9.2
06_01_0368 + 2645007-2645317,2645422-2645509,2648927-2649183,264... 27 9.2
05_01_0362 - 2832100-2832123,2832566-2832596,2832805-2833541,283... 27 9.2
03_01_0038 - 340564-341108,341214-341463,341546-341649,341728-34... 27 9.2
01_05_0596 + 23511148-23512650 27 9.2
>07_03_0630 - 20097672-20097772,20097983-20102012
Length = 1376
Score = 33.5 bits (73), Expect = 0.14
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -2
Query: 324 RLPLPTLFYRLEALHLGDLLRIWDEPARHLHVHPSPEFSRSAESIRTPPQMRCS-SRSEP 148
+L +P + E LH D+ + W + A + HP E S E IR P + R+
Sbjct: 202 KLHVPHKGWITETLHKIDMSK-WTQQAIEVSPHPENEKSNKVEYIRHPHDSAVTYLRNPA 260
Query: 147 YLPSIGFHGTRSLRQNRNLFPDLSAASSGHFG 52
+P +G G + +F D + HFG
Sbjct: 261 VIPIVGISGVGKSALAKFIFDDANVRE--HFG 290
>10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297
Length = 311
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -1
Query: 436 NARTSTRPGTGASASRPNPTRPGP 365
+A T+TR +GA+ +RP PTRP P
Sbjct: 279 SAATTTRNNSGAAPARPVPTRPWP 302
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 30.7 bits (66), Expect = 0.99
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 439 HNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTS 317
H RT PG G+S+ P P ++ S RS G + P S
Sbjct: 15 HVGRTPETPGRGSSSGSPAPGGSASKAVSFARSLGVHFPRS 55
>02_05_1170 +
34663853-34663928,34664038-34664078,34664317-34664386,
34664499-34664647,34664784-34664879,34665406-34665476,
34665637-34665698,34665778-34665841,34665950-34666034,
34666129-34666255,34666381-34666454,34666539-34666599,
34666683-34666771,34666897-34667206,34667763-34667815,
34668299-34668370,34668648-34668914,34669015-34669047,
34669163-34669245,34669522-34669594,34669834-34670170,
34670302-34670633,34670816-34671135,34671261-34671612,
34671691-34671906
Length = 1170
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = -1
Query: 430 RTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGR 251
RTS+R G+ + + + +RPG + + + Y TS + +R SS R +G
Sbjct: 371 RTSSRTGSASRRAVASSSRPGSSVEPMEQQYSR---TSRLFSSSGSRPSSTQRVNPSVGE 427
Query: 250 TGATS 236
T ATS
Sbjct: 428 TRATS 432
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 29.9 bits (64), Expect = 1.7
Identities = 48/180 (26%), Positives = 65/180 (36%), Gaps = 1/180 (0%)
Frame = -1
Query: 622 QNRADRARTKPTRLTARKIRGRPENAGPDPVRNVRR-FSECHIKYIQFLRPHYIKILTR* 446
+ R + T P R K P A R RR C ++ R H + L R
Sbjct: 45 RRRPPPSPTPPARRRPTKPASPPTGAALYRARRCRRKLLRCRARH----RRHRDRCLHRA 100
Query: 445 NEHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPA 266
H R +T P T SA+ P RP + + G + T +T GSS
Sbjct: 101 QRHLHRPAT-PSTEPSAAATEPYRPSSEKKYTMSQQGEPMST-------TTNGSS----R 148
Query: 265 ADMGRTGATSPRTSLT*IFKVRREYPDTAANAVLFAFRTISPFYRIPWNSIAQAE*KSLP 86
A RTG P+ I V T+ +L FR+I SI Q + K +P
Sbjct: 149 ARTPRTGNKIPKERFR-ITAVDAVGLPTSPRKILSRFRSICGVIGRQKFSILQDDIKLVP 207
>12_01_0796 +
7292523-7292783,7292963-7293018,7295274-7295331,
7295777-7295843,7296461-7296516,7296638-7296691,
7296836-7296961
Length = 225
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 402 HPLPVQTRHAPVLRANPYSEVTDPICRLPL 313
H L + RH P L+A P S + C+LPL
Sbjct: 107 HSLIIPKRHFPSLQATPPSVIAAICCKLPL 136
>08_01_0578 + 5139324-5140190
Length = 288
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 424 STRPGTGASASRPNPTRPGP-QSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGRT 248
ST P T + S P P+R GP + +S + L S +LS+ +S AAD
Sbjct: 15 STTPATSTALSTPPPSRAGPDELRSTWAHRAWTLAGSAA--VLSSLSTSATLAAADADAN 72
Query: 247 GATS 236
GA +
Sbjct: 73 GAAA 76
>03_04_0090 +
17228253-17228403,17229062-17229129,17229238-17230902,
17231002-17231143,17231648-17232399
Length = 925
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 402 HPLPVQTRHAPVLRANP 352
H +PVQ H+PVL+ NP
Sbjct: 340 HSVPVQKNHSPVLKTNP 356
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -2
Query: 255 DEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGF-HGTRSLRQNRN 94
++ AR PSP RS R+P + R S RS Y P + G RS +R+
Sbjct: 508 EKDARGKSRSPSPSARRSKSRSRSPIKYRRSRRSRSYSPPVRHTRGRRSRSPSRS 562
>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
Length = 553
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/74 (29%), Positives = 31/74 (41%)
Frame = -2
Query: 282 HLGDLLRIWDEPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRSLRQ 103
HL +++ RH V SP R+ + RT P R + R PSI + Q
Sbjct: 240 HLANVVNQGLTQTRHTSVRVSPSVGRTVSATRTTPATR-AGRGMSNAPSI------QIPQ 292
Query: 102 NRNLFPDLSAASSG 61
+R F + A S G
Sbjct: 293 SRTRFKRVGATSPG 306
>06_01_0268 +
1989069-1989293,1989938-1990020,1990136-1990357,
1990434-1990621,1990711-1990835,1990988-1991039,
1991585-1991874,1992229-1992307,1992527-1992657
Length = 464
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -2
Query: 396 LPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEAL 283
+P Q + A + A+P + V C LP P+LF L L
Sbjct: 292 IPYQFQEATSILASPLAHVPASSCPLPAPSLFSSLPLL 329
>02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385
Length = 373
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = -1
Query: 484 FLRPHYIKILTR*NEHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYI 305
F P Y+ + + T+ ASAS +P QS RS +++ SL
Sbjct: 209 FAYPQYVWCHSPRDSTTTTTAASASASASASSSSPATVAAALQSEHRSGLADIEVSLVET 268
Query: 304 ILSTRGSSPWRP 269
S R SP RP
Sbjct: 269 HASVRVMSPRRP 280
>11_08_0032 -
27807489-27807497,27807641-27807684,27808046-27808168,
27810770-27810983,27811382-27811530,27811719-27812618,
27812964-27814659
Length = 1044
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 424 STRPGTGASASRPNPTRPGPQSQSLFRSY 338
+TRPG A+ N T GPQ +FR +
Sbjct: 904 TTRPGKKLMATTANRTSKGPQDNRVFREH 932
>01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305
Length = 196
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -1
Query: 400 SASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPA--ADMGR 251
SAS P+P +P P S SL R+ S +Y G W A A GR
Sbjct: 15 SASLPSPAQPAPASLSL-RAVSPRARLSASYAAFPIGGIGAWAAATPASSGR 65
>12_02_0877 - 23946449-23948284
Length = 611
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 424 STRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSL 314
ST + ASA RP PT P + L + ++LP L
Sbjct: 4 STAASSSASAVRPPPTWGAPSQRRLVEQHLASLPRGL 40
>05_04_0145 - 18391112-18392461,18392545-18392637
Length = 480
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 429 EHRPDPAPAHPLPVQTRHAPVLRANPYS 346
+H AP+ P P + RHAP A YS
Sbjct: 42 DHGSSNAPSPPTPRRARHAPATTAVTYS 69
>07_03_0078 - 13147741-13148913
Length = 390
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 537 SGPAFSGLPRIFLAVSRVGFVRARSARF 620
SGP + G R+F+A+S +G + A +
Sbjct: 223 SGPIYKGRERVFIAISDIGMLAVSLALY 250
>06_01_0368 +
2645007-2645317,2645422-2645509,2648927-2649183,
2649453-2649504,2649527-2649838
Length = 339
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 418 RP-GTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGRTGA 242
RP G +A P PT P P+ S+ SY + +L Y++L+ G+S P D T +
Sbjct: 199 RPTGPRPAAHVPRPTPPSPRKVSVSGSY---VGLAL-YVVLAAAGTSSRGPPLDHAGTSS 254
>05_01_0362 -
2832100-2832123,2832566-2832596,2832805-2833541,
2834333-2834825,2835762-2835770,2838062-2838561
Length = 597
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 417 DPAPAHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLE 289
DP + PL PV + Y + P CR+ + +LF +E
Sbjct: 551 DPGRSCPLDSLPDETPVEKLYVYRTIAGPRCRMKIHSLFQDME 593
>03_01_0038 -
340564-341108,341214-341463,341546-341649,341728-343255,
343995-344056,344578-344728
Length = 879
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -2
Query: 363 RANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWDEPARHLHVHPSPEFSRSAESIRT 184
R + E+ I ++FY HL D+L E H HP+ S+S + +
Sbjct: 446 RNDGLGEINGDIITSKDTSIFYEEAKKHLTDIL----EYNSHTTKHPTVHTSKSLIGMLS 501
Query: 183 PPQMRCSS-RSEPYL 142
PQ SS RS P L
Sbjct: 502 LPQRNASSPRSSPRL 516
>01_05_0596 + 23511148-23512650
Length = 500
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 44 RGNPKWPEEAAERSGKRFLFCLSDR 118
RG+ +P + + R G+ F +CL DR
Sbjct: 277 RGSLSFPSQISRRFGRSFSYCLVDR 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,450,607
Number of Sequences: 37544
Number of extensions: 429954
Number of successful extensions: 1790
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1788
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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