Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0647
(628 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro... 29 3.9
AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p pro... 29 3.9
AY069440-1|AAL39585.1| 664|Drosophila melanogaster LD15107p pro... 29 3.9
AE014297-12|AAF52169.1| 1165|Drosophila melanogaster CG1107-PB, ... 29 3.9
AE014297-11|AAF52168.1| 1165|Drosophila melanogaster CG1107-PA, ... 29 3.9
AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA... 29 3.9
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P... 29 3.9
BT001290-1|AAN71046.1| 406|Drosophila melanogaster AT09701p pro... 29 5.1
AY052003-1|AAK93427.1| 628|Drosophila melanogaster LD46863p pro... 29 5.1
AE014297-4724|AAF57132.2| 628|Drosophila melanogaster CG12054-P... 29 5.1
>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p
protein.
Length = 1872
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 436 NARTSTRPGTGASASRPNPTRPG 368
++R S RPG SASR P+RPG
Sbjct: 882 SSRESGRPGDSRSASRGPPSRPG 904
>AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p
protein.
Length = 1099
Score = 29.5 bits (63), Expect = 3.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 432 HEHRPDPAPAHPLPVQ 385
H PDPAPA P+P+Q
Sbjct: 572 HHPSPDPAPASPIPIQ 587
>AY069440-1|AAL39585.1| 664|Drosophila melanogaster LD15107p
protein.
Length = 664
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Frame = -2
Query: 246 ARHLHVHPSPEFSRSAESIRTPPQMRC-SSRSEPYLPSIGFHGTRSLRQ-------NRNL 91
A +H P+P+ S SIRTP Q + ++S P + F ++ +Q N ++
Sbjct: 470 ATFMHTPPTPQTLPSTSSIRTPTQPQAVPAQSRPDYSRLHFDSQKAAQQPGTGGSKNSDI 529
Query: 90 FPDLSAASSGHFG 52
F D+ FG
Sbjct: 530 FADILGQQGYSFG 542
>AE014297-12|AAF52169.1| 1165|Drosophila melanogaster CG1107-PB,
isoform B protein.
Length = 1165
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Frame = -2
Query: 246 ARHLHVHPSPEFSRSAESIRTPPQMRC-SSRSEPYLPSIGFHGTRSLRQ-------NRNL 91
A +H P+P+ S SIRTP Q + ++S P + F ++ +Q N ++
Sbjct: 971 ATFMHTPPTPQTLPSTSSIRTPTQPQAVPAQSRPDYSRLHFDSQKAAQQPGTGGSKNSDI 1030
Query: 90 FPDLSAASSGHFG 52
F D+ FG
Sbjct: 1031 FADILGQQGYSFG 1043
>AE014297-11|AAF52168.1| 1165|Drosophila melanogaster CG1107-PA,
isoform A protein.
Length = 1165
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Frame = -2
Query: 246 ARHLHVHPSPEFSRSAESIRTPPQMRC-SSRSEPYLPSIGFHGTRSLRQ-------NRNL 91
A +H P+P+ S SIRTP Q + ++S P + F ++ +Q N ++
Sbjct: 971 ATFMHTPPTPQTLPSTSSIRTPTQPQAVPAQSRPDYSRLHFDSQKAAQQPGTGGSKNSDI 1030
Query: 90 FPDLSAASSGHFG 52
F D+ FG
Sbjct: 1031 FADILGQQGYSFG 1043
>AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA
protein.
Length = 1099
Score = 29.5 bits (63), Expect = 3.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 432 HEHRPDPAPAHPLPVQ 385
H PDPAPA P+P+Q
Sbjct: 572 HHPSPDPAPASPIPIQ 587
>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
protein.
Length = 1831
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 436 NARTSTRPGTGASASRPNPTRPG 368
++R S RPG SASR P+RPG
Sbjct: 880 SSRESGRPGDSRSASRGPPSRPG 902
>BT001290-1|AAN71046.1| 406|Drosophila melanogaster AT09701p
protein.
Length = 406
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = -1
Query: 433 ARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYI---ILSTRGSSPWRPAA 263
A +T G+ ++S PNP +S S +S GS P+S++ + S G S
Sbjct: 143 ASAATPVGSSNTSSNPNPPPIIQRSNSPSQSLGSLSPSSISNMSSSASSCHGGSGSLSNG 202
Query: 262 DMGRTGATSPRTSL 221
+ G G+T+ T++
Sbjct: 203 NNGNNGSTTSNTAI 216
>AY052003-1|AAK93427.1| 628|Drosophila melanogaster LD46863p
protein.
Length = 628
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = -1
Query: 433 ARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYI---ILSTRGSSPWRPAA 263
A +T G+ ++S PNP +S S +S GS P+S++ + S G S
Sbjct: 253 ASAATPVGSSNTSSNPNPPPIIQRSNSPSQSLGSLSPSSISNMSSSASSCHGGSGSLSNG 312
Query: 262 DMGRTGATSPRTSL 221
+ G G+T+ T++
Sbjct: 313 NNGNNGSTTSNTAI 326
>AE014297-4724|AAF57132.2| 628|Drosophila melanogaster CG12054-PA
protein.
Length = 628
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = -1
Query: 433 ARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYI---ILSTRGSSPWRPAA 263
A +T G+ ++S PNP +S S +S GS P+S++ + S G S
Sbjct: 253 ASAATPVGSSNTSSNPNPPPIIQRSNSPSQSLGSLSPSSISNMSSSASSCHGGSGSLSNG 312
Query: 262 DMGRTGATSPRTSL 221
+ G G+T+ T++
Sbjct: 313 NNGNNGSTTSNTAI 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,104,325
Number of Sequences: 53049
Number of extensions: 692142
Number of successful extensions: 2800
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2791
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -