Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0636
         (528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    24   2.7  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   2.7  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   2.7  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    23   4.8  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   4.8  
AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative odorant-b...    23   6.3  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.4  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.4  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   8.4  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 110 LALRTGACRVWTGSGCGRCRVWSM 181
           +++  G   V  G+ C  C VWSM
Sbjct: 5   ISVHVGQAGVQIGNPCWDCTVWSM 28


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 174 QTRHRPHPLPVQTRHAPVLRANPYSEVT 91
           Q  H PH    Q +H P   + P++ V+
Sbjct: 72  QLHHSPHQYHQQVQHQPQPPSTPFANVS 99


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 174 QTRHRPHPLPVQTRHAPVLRANPYSEVT 91
           Q  H PH    Q +H P   + P++ V+
Sbjct: 73  QLHHSPHQYHQQVQHQPQPPSTPFANVS 100


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -2

Query: 440 LDSRIPLVRASSELTVERRSYRIVPIAHETKPTRLTARKIRGRP 309
           + + + L     E  V+     I+P A  +KPT  T + I  +P
Sbjct: 17  IGASVGLPTVDEENVVQAEQLPILPTADSSKPTDDTVKAIAPQP 60


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 397 PLNGGRTESCRSRTKRNR 344
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


>AJ697721-1|CAG26914.1|  135|Anopheles gambiae putative
           odorant-binding protein OBPjj11 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 413 HGQGESDCLI-KTKHCDGPRGC*RNVISAQC 502
           +GQ ++D L+ + ++ DGP  C R+    QC
Sbjct: 95  YGQEKADELVARCRNNDGPDACERSFRLLQC 125


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 148 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 246
           K +RPV    DV  +C   ++S LI   LKN I
Sbjct: 41  KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 73


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 148 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 246
           K +RPV    DV  +C   ++S LI   LKN I
Sbjct: 41  KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 73


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +1

Query: 88  IRNFGIRIGSEDRGVSGLDGKRMRPVPG 171
           I N  I      R VSGLD  R  P PG
Sbjct: 10  IGNLFIEPNRYRRIVSGLDSTRGSPAPG 37


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,303
Number of Sequences: 2352
Number of extensions: 10519
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)