Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0636
(528 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 26 0.27
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 26 0.27
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 26 0.27
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 26 0.27
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 26 0.27
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 26 0.27
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 0.84
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 1.9
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 1.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 1.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 1.9
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 5.9
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 5.9
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 7.8
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 7.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.8
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 382 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 284
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 382 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 284
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 382 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 284
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 382 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 284
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.8 bits (54), Expect = 0.27
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 382 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 284
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.27
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 382 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 284
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 0.84
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 382 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 284
RT SC SR + RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRS 258
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 382 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 284
RT SC SR + +RH+ +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDGNSYRNDGERSCSRDRS 258
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 1.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 371 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 270
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 1.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 371 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 270
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 1.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 371 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 270
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 164 TGRIRFPSKPDTPRSSEPILIPKLRIQFADFLYLHYSND 48
T R R + + RS EP +I L + Y +Y+N+
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNN 100
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 164 TGRIRFPSKPDTPRSSEPILIPKLRIQFADFLYLHYSND 48
T R R + + RS EP +I L + Y +Y+N+
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNN 100
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 164 TGRIRFPSKPDTPRSSEPILIPKLRIQFADFLYLHYSND 48
T R R + + RS EP +I L + Y +Y+N+
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNN 100
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -2
Query: 164 TGRIRFPSKPDTPRSSEPILIPKLRIQFADFLYLHYSND 48
T R R + + RS EP +I L + Y +Y+N+
Sbjct: 62 TSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNN 100
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 2.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 148 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 246
K +RPV DV +C ++S LI LKN I
Sbjct: 42 KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 2.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 148 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 246
K +RPV DV +C ++S LI LKN I
Sbjct: 42 KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 5.9
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -2
Query: 164 TGRIRFPSKPDTPRSSEPILIPKLRIQFADFLYLHYSND 48
T + R + + RS EP +I L + Y +Y+N+
Sbjct: 295 TSKERSRDRTERERSKEPKIISSLSNNYKYSNYNNYNNN 333
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 5.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 395 VERRSYRIVPIAHETKPTRLTARKIRGRPEN 303
VE + Y+ V I+ T+P+ T + P N
Sbjct: 183 VEEQRYKQVEISQMTEPSSSTKSYVLEGPRN 213
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.0 bits (42), Expect = 7.8
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -2
Query: 164 TGRIRFPSKPDTPRSSEPILIPKLRIQFADFLYLHYSN 51
T + R + + RS EP +I L + Y +Y+N
Sbjct: 62 TSKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNN 99
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 7.8
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -2
Query: 164 TGRIRFPSKPDTPRSSEPILIPKLRIQFADFLYLHYSN 51
T + R + + RS EP +I L + Y +Y+N
Sbjct: 295 TSKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNN 332
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 7.8
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -1
Query: 159 PHPLPVQTRHAPVLRANPYSEV 94
P PLP A + + +PYS +
Sbjct: 652 PFPLPPNLASANISQLDPYSSL 673
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,451
Number of Sequences: 438
Number of extensions: 3276
Number of successful extensions: 31
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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