Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0619
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   3.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   5.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   6.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.1  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   9.1  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   9.1  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 441 HRRIKKQRRYERLAATSQLSLWYFSGTSC*KLFI 542
           ++R   Q  YE+L     L LW   G S  KL +
Sbjct: 231 YKRPHDQWAYEKLNVNDGLQLWVDYGCSPKKLIV 264


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -1

Query: 534 VFSKRCQKSTTGITGLWQPSVH 469
           V+S +C+ ++TG+   ++   H
Sbjct: 167 VYSSKCENNSTGVEHFFKKQFH 188


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 253 SAERPVVRSYHPRDY 209
           SA  P+VRSY P  Y
Sbjct: 281 SAATPLVRSYAPERY 295


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 248 RAAGGAKLPSAGLC 207
           ++  G ++PSAGLC
Sbjct: 99  KSCQGCEMPSAGLC 112


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 248 RAAGGAKLPSAGLC 207
           ++  G ++PSAGLC
Sbjct: 47  KSCQGCEMPSAGLC 60


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 248 RAAGGAKLPSAGLC 207
           ++  G ++PSAGLC
Sbjct: 230 KSCQGCEMPSAGLC 243


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 526 QEVPEKYHRDNWL 488
           Q+VP KY  D W+
Sbjct: 314 QKVPYKYKDDQWI 326


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 169 DSARLASALEAFRHNPADGSFAPPAARPR 255
           D+A   +A E    NP + +   P  RPR
Sbjct: 291 DAAEFLAAQEIPGQNPGEKTNIAPRERPR 319


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 511 KYHRDNWLVAAK 476
           K+H   W+VA K
Sbjct: 34  KFHNSRWMVAGK 45


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 511 KYHRDNWLVAAK 476
           K+H   W+VA K
Sbjct: 34  KFHNSRWMVAGK 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,364
Number of Sequences: 336
Number of extensions: 3408
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)