Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0619
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    25   2.9  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   5.0  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   5.0  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   6.6  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -1

Query: 297 LSTRGTAVSDIWFMPRPSGRWCEATIRGIMPE 202
           L T+    +++ F+ R S RWCE T+  ++ +
Sbjct: 349 LGTQVIGTTEV-FLDRESCRWCECTLGDLIAD 379


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 20/80 (25%), Positives = 33/80 (41%)
 Frame = -2

Query: 278 QFRTFGSCLGRAAGGAKLPSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSR 99
           Q + + + +G  AGG +        +   ++    + G +     PR   GSK     S 
Sbjct: 64  QPKDYSAPIGFIAGGIQQSGKKPEKDRKPSDEDDDDEGDEANDARPRF--GSKAAAANSS 121

Query: 98  VSHSKRETRRRSPFGSRRSM 39
            + S+ E  RR+P    RSM
Sbjct: 122 ATSSESEDERRTPPQDMRSM 141


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 235 PPAARPRHEPNVRNCGSSRTEQY 303
           PP   P+H    R   S RT Q+
Sbjct: 65  PPVPPPKHSQRRRRSSSPRTRQF 87


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +1

Query: 172 SARLASALEAFRHNPADGSFAPPAARPRHEPNVR 273
           S R A  + + R    DG   PP  RP     +R
Sbjct: 499 SKRNAHTMASLREKLVDGGSTPPHCRPSDIEEIR 532


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,589
Number of Sequences: 2352
Number of extensions: 14237
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)