Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0619
         (669 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    62   1e-09
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro...    31   3.7  
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   6.5  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   6.5  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = +1

Query: 424 MIGRADIEGSKSNVAMNAWLPQASYPCGTF 513
           MIGRADIEGSKS+VAMNAW PQASYPCG F
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30


>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting
           protein protein.
          Length = 1183

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
 Frame = -2

Query: 335 YPTDGLSLR**YCSVREEPQFRTFGSCLGRAAGGAKLPSAGLCLNASKAEASLAESGKDM 156
           YP   L+LR     +RE+P + +F +   R   GA+    GL   A+K   + AES + M
Sbjct: 91  YPQHALALRGQQDRMREQPNYWSFKTRSSRHTQGAQ---PGLADQAAKLSYASAESLETM 147

Query: 155 LTVEPRESGGSKQCDFTSR--VSHSKRETRRRSP 60
              E    G S+   F     +S S  +T+ RSP
Sbjct: 148 SEAE-LPLGFSRMNRFRQSLPLSRSASQTKPRSP 180


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 202 TPLRPKPA*PNPARICSLWSPESRE 128
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 202 TPLRPKPA*PNPARICSLWSPESRE 128
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,004,007
Number of Sequences: 237096
Number of extensions: 2307866
Number of successful extensions: 5137
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5133
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)