Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0611
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p pro...    28   9.3  
AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-P...    28   9.3  
AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-P...    28   9.3  

>AY075291-1|AAL68158.2| 1193|Drosophila melanogaster AT30755p protein.
          Length = 1193

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -1

Query: 138  SKAEASLAEPGKDMLTVEPRESGGPKQCDLTSRVSHSKRETRRR 7
            SK EA +    KD+   EP ES   K+   TS  S SK+E++R+
Sbjct: 942  SKTEAVIEPVAKDVSMAEPNESLHSKK--ETSPASLSKQESKRK 983


>AE014297-3139|AAN14374.2| 1304|Drosophila melanogaster CG31169-PB,
            isoform B protein.
          Length = 1304

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -1

Query: 138  SKAEASLAEPGKDMLTVEPRESGGPKQCDLTSRVSHSKRETRRR 7
            SK EA +    KD+   EP ES   K+   TS  S SK+E++R+
Sbjct: 1053 SKTEAVIEPVAKDVSMAEPNESLHSKK--ETSPASLSKQESKRK 1094


>AE014297-3138|AAF55983.2| 1469|Drosophila melanogaster CG31169-PA,
            isoform A protein.
          Length = 1469

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = -1

Query: 138  SKAEASLAEPGKDMLTVEPRESGGPKQCDLTSRVSHSKRETRRR 7
            SK EA +    KD+   EP ES   K+   TS  S SK+E++R+
Sbjct: 1218 SKTEAVIEPVAKDVSMAEPNESLHSKK--ETSPASLSKQESKRK 1259


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,046,198
Number of Sequences: 53049
Number of extensions: 606518
Number of successful extensions: 1314
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)