Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0606
         (622 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 186 IKILPGYLKNLLNYFIFKLQSKPLLRHRLEQ 278
           +K+L     ++L  F++ L  +PL    LE+
Sbjct: 139 VKVLANEFLSILPIFLYALGEQPLTEQNLEE 169


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 186 IKILPGYLKNLLNYFIFKLQSKPLLRHRLEQ 278
           +K+L     ++L  F++ L  +PL    LE+
Sbjct: 177 VKVLANEFLSILPIFLYALGEQPLTEQNLEE 207


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/16 (62%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -3

Query: 62  HLS-KGKPSKMQISIH 18
           HL+ KGKP +M+I IH
Sbjct: 573 HLTHKGKPIRMRIGIH 588


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 37  LLGFPFER*MYFLNFTV 87
           + GFP +R M+  NFT+
Sbjct: 649 VFGFPLDRPMWAWNFTI 665


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 37  LLGFPFER*MYFLNFTV 87
           + GFP +R M+  NFT+
Sbjct: 649 VFGFPLDRPMWAWNFTI 665


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 118 LNRLHYNEPPKL 83
           L  LHY +PP L
Sbjct: 361 LQHLHYRQPPTL 372


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,832
Number of Sequences: 438
Number of extensions: 3965
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)