Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0584
(633 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 28 0.066
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 26 0.35
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 26 0.35
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 26 0.35
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 26 0.35
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 26 0.35
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 26 0.35
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.5
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.5
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.5
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 7.5
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 7.5
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 7.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 7.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 7.5
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 7.5
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 9.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.9
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 28.3 bits (60), Expect = 0.066
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 280 ILIPKLRIHLPTSLTYIILST-RGSSP 203
+ +P+ R +P +LTYI L T RG SP
Sbjct: 81 VTVPRWRNGIPATLTYISLDTNRGGSP 107
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.35
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 553 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 455
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.35
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 553 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 455
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.35
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 553 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 455
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.35
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 553 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 455
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.8 bits (54), Expect = 0.35
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 553 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 455
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.8 bits (54), Expect = 0.35
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 553 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 455
RT SC SR + +RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRS 258
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 553 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 455
RT SC SR + RH+ R +G R+ R +S
Sbjct: 226 RTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRS 258
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 2.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 553 RTESCRSRTKRNRHDLRLGRSAEGRRTRVRIQS 455
RT SC SR + +RH+ +G R+ R +S
Sbjct: 226 RTSSCHSRYEDSRHEDGNSYRNDGERSCSRDRS 258
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 542 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 441
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 542 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 441
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 542 VPIAHETKPTRLTARKIRGRPENAGPDPVRNVRR 441
VPI TKP AR +G N G + V V++
Sbjct: 292 VPIDANTKPCTWAARPWQGYMTNNGVNNVEAVQK 325
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 318 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 416
K +RPV DV +C ++S LI LKN I
Sbjct: 42 KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 318 KRMRPVPGLVDVRALCSF*RVSILI*CGLKNCI 416
K +RPV DV +C ++S LI LKN I
Sbjct: 42 KLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQI 74
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 7.5
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -2
Query: 500 RKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTNSLKRT*RTNIDQTRHRPHP 321
RK R + D R R S+ I ++ ++ N N+ K+ NI+ P P
Sbjct: 57 RKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVP 114
Query: 320 LPV 312
+PV
Sbjct: 115 VPV 117
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 7.5
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -2
Query: 500 RKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTNSLKRT*RTNIDQTRHRPHP 321
RK R + D R R S+ I ++ ++ N N+ K+ NI+ P P
Sbjct: 57 RKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVP 114
Query: 320 LPV 312
+PV
Sbjct: 115 VPV 117
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 7.5
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -2
Query: 500 RKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTNSLKRT*RTNIDQTRHRPHP 321
RK R + D R R S+ I ++ ++ N N+ K+ NI+ P P
Sbjct: 57 RKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVP 114
Query: 320 LPV 312
+PV
Sbjct: 115 VPV 117
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 80 SEPYLPSIGFHGTRTLRQKRKLFPD 6
SE P+ HG R RQ+ + D
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALAD 496
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 7.5
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -2
Query: 500 RKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTNSLKRT*RTNIDQTRHRPHP 321
RK R + D R R S+ I ++ ++ N N+ K+ NI+ P P
Sbjct: 290 RKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVP 347
Query: 320 LPV 312
+PV
Sbjct: 348 VPV 350
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 7.5
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 566 VERRSYRIVPIAHETKPTRLTARKIRGRPEN 474
VE + Y+ V I+ T+P+ T + P N
Sbjct: 183 VEEQRYKQVEISQMTEPSSSTKSYVLEGPRN 213
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.0 bits (42), Expect = 9.9
Identities = 16/63 (25%), Positives = 27/63 (42%)
Frame = -2
Query: 500 RKIRGRPENAGPDPVRNVRRFSRVSY*IYTVFEAALY*NTNSLKRT*RTNIDQTRHRPHP 321
RK R + D R R S+ I ++ ++ N N+ K+ NI+ P P
Sbjct: 57 RKYRETSKERSRD--RKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQIPVP 114
Query: 320 LPV 312
+P+
Sbjct: 115 VPI 117
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2
Query: 329 PHPLPVQTRHAPVLRANPYSEV 264
P PLP A + + +PYS +
Sbjct: 652 PFPLPPNLASANISQLDPYSSL 673
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,621
Number of Sequences: 438
Number of extensions: 4486
Number of successful extensions: 24
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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