Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0567
         (591 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    52   2e-06
AK000003-1|BAA92228.1|  235|Homo sapiens FLJ00003 protein protein.     35   0.25 
AC005005-2|AAD15618.1| 1056|Homo sapiens WUGSC:H_DJ412A9.2 protein.    31   2.3  
BC030221-1|AAH30221.1| 1075|Homo sapiens ABI gene family, member...    30   5.3  
BC032500-1|AAH32500.1|  247|Homo sapiens CMAH protein protein.         29   9.3  
AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens ...    29   9.3  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 51.6 bits (118), Expect = 2e-06
 Identities = 24/30 (80%), Positives = 25/30 (83%)
 Frame = -3

Query: 580 MIGRADIEGSKSNVAMNAWLPQASIPVVTF 491
           MIGRADIEGSKS+VAMNAW PQAS P   F
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30



 Score = 29.9 bits (64), Expect = 7.0
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 515 SQYPCGNFSGTSC*K 471
           + YPCGNFS TSC K
Sbjct: 23  ASYPCGNFSDTSCLK 37


>AK000003-1|BAA92228.1|  235|Homo sapiens FLJ00003 protein protein.
          Length = 235

 Score = 34.7 bits (76), Expect = 0.25
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = -1

Query: 306 SNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVV 127
           S+  PGS  +P HA V TA + + + P    G     P +++ R    P+  S  T    
Sbjct: 50  SSHTPGS-RQPGHASVPTARARTLSPPQHRCGFACLGPREVVGRTSGHPSMQS--TPGFT 106

Query: 126 VFQRRSRETISHLCYTSHVSL 64
               R RET S LC+  H +L
Sbjct: 107 FGNLRVRETSSRLCHKLHQNL 127


>AC005005-2|AAD15618.1| 1056|Homo sapiens WUGSC:H_DJ412A9.2 protein.
          Length = 1056

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 25/73 (34%), Positives = 33/73 (45%)
 Frame = -1

Query: 369 SVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLTATSVSATSPLCTLGTKHRAPA 190
           S LA  ++G L  S +  P    +  GSVL P   G++   S    SP  TLG  + AP 
Sbjct: 116 SSLAPTSVGQLVMSASAGPKPPPATTGSVLAPTSLGLVMPASAGPRSPPVTLG-PNLAPT 174

Query: 189 DIIDRAPLPPNRV 151
              D+   PP  V
Sbjct: 175 S-RDQKQEPPASV 186


>BC030221-1|AAH30221.1| 1075|Homo sapiens ABI gene family, member 3
           (NESH) binding protein protein.
          Length = 1075

 Score = 30.3 bits (65), Expect = 5.3
 Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
 Frame = -1

Query: 417 EHLDQASFCPFAPR--EVSVLAELALGHLRYSLTDVPPQSNSP---PGSVLEPDHAGVLT 253
           E  DQ++  PF  +    + LA+      R+  T  P  S+ P   PG    P  +G   
Sbjct: 630 EETDQSTQEPFTTKIPRTTELAKTTQAPHRFYTTVRPRTSDKPHIRPGVKQAPRPSGADR 689

Query: 252 ATSVSATSPLCTLGTKHRAPADIID----RAPLPPNRVSNE 142
             SV +T P    GT+ R P         R PLPPN V+ +
Sbjct: 690 NVSVDSTHPTKKPGTR-RPPLPPRPTHPRRKPLPPNNVTGK 729


>BC032500-1|AAH32500.1|  247|Homo sapiens CMAH protein protein.
          Length = 247

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 283 PRTGSRGSFNGDERFRHVTTLHAWNETPCARRYYR 179
           P T S G F G+  +   T  HAW+   C +  Y+
Sbjct: 211 PMTFSGGKFTGNILYESDTKYHAWHIAKCCKSKYK 245


>AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45380 fis, clone BRHIP3020733. ).
          Length = 223

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -1

Query: 276 PDHAGVLTATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR 154
           P  A  + A S+ A +P C L   HR    + D   LPP+R
Sbjct: 146 PTPALWVDAPSLPAQAPWCLLSPGHRGATSLPDTMMLPPSR 186


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,339,137
Number of Sequences: 237096
Number of extensions: 2079602
Number of successful extensions: 4988
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4988
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)