Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0555
(454 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p pro... 29 2.9
AY075310-1|AAO39630.1| 145|Drosophila melanogaster AT31918p pro... 28 5.1
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 28 5.1
AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro... 27 8.9
AY071730-1|AAL49352.1| 702|Drosophila melanogaster RH44902p pro... 27 8.9
AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptio... 27 8.9
AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj prot... 27 8.9
AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240... 27 8.9
AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 prot... 27 8.9
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA... 27 8.9
AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD... 27 8.9
AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC... 27 8.9
AE014134-1888|AAF52952.2| 702|Drosophila melanogaster CG5337-PA... 27 8.9
>AY061451-1|AAL28999.1| 249|Drosophila melanogaster LD38807p
protein.
Length = 249
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -1
Query: 424 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 302
S+ TI CY ++S QCQ R+ +VFF S A C
Sbjct: 14 SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57
>AY075310-1|AAO39630.1| 145|Drosophila melanogaster AT31918p
protein.
Length = 145
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 183 TRACLNFFTLTFRALGRNHIASTPARAIAMLCFN*TVGFPLSVPVL 46
T AC+ + T+ F +G +IA+ + A + VGF L VL
Sbjct: 17 TTACIFYITMCFMMIGCKYIANANPKRFAKIVHPSAVGFVLVGTVL 62
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -2
Query: 411 SPTYATPLMSPYNARLESSSTGSSFPADSPKP 316
+P++ + S Y A +S+S+G +PA +P+P
Sbjct: 153 APSFNSAPSSSYAAPSQSASSGGPYPAAAPRP 184
>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p protein.
Length = 2486
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 420 AKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLA 304
A+ S +PL P A + S+T SF + S P PLA
Sbjct: 1650 ARSSCNAISPLSIPATAGIHVSATNPSFQSSSYFPTPLA 1688
>AY071730-1|AAL49352.1| 702|Drosophila melanogaster RH44902p
protein.
Length = 702
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 429 DDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPK 319
D A +P + TP + + LE +G+S PAD K
Sbjct: 216 DGPATDNPKWTTPELLAFKHNLEFPDSGNSTPADRQK 252
>AF324425-1|AAG48327.1| 2618|Drosophila melanogaster transcriptional
coactivator blindspot protein.
Length = 2618
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 423 RAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 295
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AF227215-1|AAF43172.1| 2618|Drosophila melanogaster jlkjlkj protein.
Length = 2618
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 423 RAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 295
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AF227214-1|AAF43021.1| 2618|Drosophila melanogaster Pap/DTRAP240
protein.
Length = 2618
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 423 RAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 295
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AF226855-1|AAF36691.1| 2618|Drosophila melanogaster TRAP240 protein.
Length = 2618
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 423 RAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 295
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
protein.
Length = 2486
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 420 AKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLA 304
A+ S +PL P A + S+T SF + S P PLA
Sbjct: 1650 ARSSCNAISPLSIPATAGIHVSATNPSFQSSSYFPTPLA 1688
>AE014296-3458|AAN12149.1| 2618|Drosophila melanogaster CG9936-PD,
isoform D protein.
Length = 2618
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 423 RAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 295
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AE014296-3457|AAN12148.1| 2618|Drosophila melanogaster CG9936-PC,
isoform C protein.
Length = 2618
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -2
Query: 423 RAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVS 295
RA SP P M PY AR S + P P LAV S
Sbjct: 1310 RAGMSPISPGPGMGPYAARSSPMSRATPTHPPPPYPYDLAVAS 1352
>AE014134-1888|AAF52952.2| 702|Drosophila melanogaster CG5337-PA
protein.
Length = 702
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 429 DDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSPK 319
D A +P + TP + + LE +G+S PAD K
Sbjct: 216 DGPATDNPKWTTPELLAFKHNLEFPDSGNSTPADRQK 252
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,320,956
Number of Sequences: 53049
Number of extensions: 393926
Number of successful extensions: 1254
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -