Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0554
(553 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for MG... 74 4e-13
X54133-1|CAA38068.1| 1523|Homo sapiens protein-tyrosine phosphat... 31 2.7
L38929-1|AAC41749.1| 1912|Homo sapiens protein tyrosine phosphat... 31 2.7
BC106716-1|AAI06717.1| 1496|Homo sapiens PTPRD protein protein. 31 2.7
BC106713-1|AAI06714.1| 1505|Homo sapiens PTPRD protein protein. 31 2.7
AL590397-1|CAH73128.2| 1912|Homo sapiens protein tyrosine phosph... 31 2.7
AL583805-2|CAH70443.2| 1912|Homo sapiens protein tyrosine phosph... 31 2.7
AL445926-1|CAH73847.2| 1912|Homo sapiens protein tyrosine phosph... 31 2.7
AL356584-1|CAI16146.2| 1912|Homo sapiens protein tyrosine phosph... 31 2.7
AL137125-1|CAH70912.2| 1912|Homo sapiens protein tyrosine phosph... 31 2.7
AB211400-1|BAE79816.1| 1912|Homo sapiens protein tyrosine phosph... 31 2.7
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 30 4.7
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 30 4.7
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 29 8.2
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 29 8.2
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 29 8.2
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 29 8.2
>BC114377-1|AAI14378.1| 44|Homo sapiens Unknown (protein for
MGC:134704) protein.
Length = 44
Score = 73.7 bits (173), Expect = 4e-13
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +2
Query: 362 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 472
MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 1 MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37
>X54133-1|CAA38068.1| 1523|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 1523
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 338 LDCSPIKRERELG*TVVRQVSFTLLMACVAIVILLSTRGTAVSDIWFMHSAERPVVRSYH 159
LD PI E E VV V + + C+ I ILL R A SD + S+H
Sbjct: 866 LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHH 925
Query: 158 PRD 150
P D
Sbjct: 926 PTD 928
>L38929-1|AAC41749.1| 1912|Homo sapiens protein tyrosine phosphatase
delta protein.
Length = 1912
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 338 LDCSPIKRERELG*TVVRQVSFTLLMACVAIVILLSTRGTAVSDIWFMHSAERPVVRSYH 159
LD PI E E VV V + + C+ I ILL R A SD + S+H
Sbjct: 1255 LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHH 1314
Query: 158 PRD 150
P D
Sbjct: 1315 PTD 1317
>BC106716-1|AAI06717.1| 1496|Homo sapiens PTPRD protein protein.
Length = 1496
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 338 LDCSPIKRERELG*TVVRQVSFTLLMACVAIVILLSTRGTAVSDIWFMHSAERPVVRSYH 159
LD PI E E VV V + + C+ I ILL R A SD + S+H
Sbjct: 839 LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHH 898
Query: 158 PRD 150
P D
Sbjct: 899 PTD 901
>BC106713-1|AAI06714.1| 1505|Homo sapiens PTPRD protein protein.
Length = 1505
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 338 LDCSPIKRERELG*TVVRQVSFTLLMACVAIVILLSTRGTAVSDIWFMHSAERPVVRSYH 159
LD PI E E VV V + + C+ I ILL R A SD + S+H
Sbjct: 834 LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHH 893
Query: 158 PRD 150
P D
Sbjct: 894 PTD 896
>AL590397-1|CAH73128.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 338 LDCSPIKRERELG*TVVRQVSFTLLMACVAIVILLSTRGTAVSDIWFMHSAERPVVRSYH 159
LD PI E E VV V + + C+ I ILL R A SD + S+H
Sbjct: 1255 LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHH 1314
Query: 158 PRD 150
P D
Sbjct: 1315 PTD 1317
>AL583805-2|CAH70443.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 338 LDCSPIKRERELG*TVVRQVSFTLLMACVAIVILLSTRGTAVSDIWFMHSAERPVVRSYH 159
LD PI E E VV V + + C+ I ILL R A SD + S+H
Sbjct: 1255 LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHH 1314
Query: 158 PRD 150
P D
Sbjct: 1315 PTD 1317
>AL445926-1|CAH73847.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 338 LDCSPIKRERELG*TVVRQVSFTLLMACVAIVILLSTRGTAVSDIWFMHSAERPVVRSYH 159
LD PI E E VV V + + C+ I ILL R A SD + S+H
Sbjct: 1255 LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHH 1314
Query: 158 PRD 150
P D
Sbjct: 1315 PTD 1317
>AL356584-1|CAI16146.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 338 LDCSPIKRERELG*TVVRQVSFTLLMACVAIVILLSTRGTAVSDIWFMHSAERPVVRSYH 159
LD PI E E VV V + + C+ I ILL R A SD + S+H
Sbjct: 1255 LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHH 1314
Query: 158 PRD 150
P D
Sbjct: 1315 PTD 1317
>AL137125-1|CAH70912.2| 1912|Homo sapiens protein tyrosine
phosphatase, receptor type, D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 338 LDCSPIKRERELG*TVVRQVSFTLLMACVAIVILLSTRGTAVSDIWFMHSAERPVVRSYH 159
LD PI E E VV V + + C+ I ILL R A SD + S+H
Sbjct: 1255 LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHH 1314
Query: 158 PRD 150
P D
Sbjct: 1315 PTD 1317
>AB211400-1|BAE79816.1| 1912|Homo sapiens protein tyrosine phosphatase
receptor type D protein.
Length = 1912
Score = 31.1 bits (67), Expect = 2.7
Identities = 22/63 (34%), Positives = 27/63 (42%)
Frame = -3
Query: 338 LDCSPIKRERELG*TVVRQVSFTLLMACVAIVILLSTRGTAVSDIWFMHSAERPVVRSYH 159
LD PI E E VV V + + C+ I ILL R A SD + S+H
Sbjct: 1255 LDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESDSRKSSIPNNKEIPSHH 1314
Query: 158 PRD 150
P D
Sbjct: 1315 PTD 1317
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 140 TPLRPKPA*PNPARICSLWSPESRE 66
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 30.3 bits (65), Expect = 4.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -3
Query: 140 TPLRPKPA*PNPARICSLWSPESRE 66
TP P P P PA +CS SPE R+
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQ 92
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 29.5 bits (63), Expect = 8.2
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -2
Query: 162 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 55
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 29.5 bits (63), Expect = 8.2
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -2
Query: 162 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 55
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 29.5 bits (63), Expect = 8.2
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -2
Query: 162 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 55
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 29.5 bits (63), Expect = 8.2
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = -2
Query: 162 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQ 55
P++G+ A++AEA+L+ES + + VEP G +Q
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQ 234
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,100,274
Number of Sequences: 237096
Number of extensions: 1748308
Number of successful extensions: 3140
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3140
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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