Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0488
(584 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 3.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 21 6.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 6.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 6.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 6.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 6.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 6.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 6.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 6.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 6.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 6.7
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 8.9
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 3.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 275 RTTGRSAECMNQMSETAVPLVLSS 346
+ G+ +C N MSE V ++L +
Sbjct: 170 KENGKEFDCHNYMSELTVDILLET 193
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 5.1
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 322 SFGHLVHALGRAAGGAKLPSAGFA*TPLRPKP 227
S LV A+ AGG PSAG P+ P P
Sbjct: 393 SMSALVSAVRSPAGGQLPPSAG---APMPPIP 421
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 377 GKTNLSHDGLNPAHVPF*WVNNPTLG 454
GK N +PA PF W ++ + G
Sbjct: 404 GKENYQTMSRDPARTPFQWDDSVSAG 429
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = +1
Query: 460 LLRNDRKSRHRRIKKQLAMNAWLPQA 537
+++ +R+ H R+KK++ + L +A
Sbjct: 43 MIQQEREREHERLKKKMILEYELRRA 68
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = +1
Query: 460 LLRNDRKSRHRRIKKQLAMNAWLPQA 537
+++ +R+ H R+KK++ + L +A
Sbjct: 43 MIQQEREREHERLKKKMILEYELRRA 68
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = +1
Query: 460 LLRNDRKSRHRRIKKQLAMNAWLPQA 537
+++ +R+ H R+KK++ + L +A
Sbjct: 43 MIQQEREREHERLKKKMILEYELRRA 68
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = +1
Query: 460 LLRNDRKSRHRRIKKQLAMNAWLPQA 537
+++ +R+ H R+KK++ + L +A
Sbjct: 43 MIQQEREREHERLKKKMILEYELRRA 68
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = +1
Query: 460 LLRNDRKSRHRRIKKQLAMNAWLPQA 537
+++ +R+ H R+KK++ + L +A
Sbjct: 43 MIQQEREREHERLKKKMILEYELRRA 68
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = +1
Query: 460 LLRNDRKSRHRRIKKQLAMNAWLPQA 537
+++ +R+ H R+KK++ + L +A
Sbjct: 43 MIQQEREREHERLKKKMILEYELRRA 68
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = +1
Query: 460 LLRNDRKSRHRRIKKQLAMNAWLPQA 537
+++ +R+ H R+KK++ + L +A
Sbjct: 43 MIQQEREREHERLKKKMILEYELRRA 68
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 6.7
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = +1
Query: 460 LLRNDRKSRHRRIKKQLAMNAWLPQA 537
+++ +R+ H R+KK++ + L +A
Sbjct: 43 MIQQEREREHERLKKKMILEYELRRA 68
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 377 GKTNLSHDGLNPAHVPF*WVNNPTLG 454
GK N +PA PF W ++ + G
Sbjct: 404 GKENYQTMSRDPARTPFQWDDSVSAG 429
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.0 bits (42), Expect = 8.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 238 LEAFRQIPRMVASHHRPLGRVHEPNVR 318
L + +I ++AS HR L NVR
Sbjct: 215 LYVYGRISCVIASRHRNLEATESENVR 241
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,853
Number of Sequences: 438
Number of extensions: 3106
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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