Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0483
(424 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 34 0.23
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 34 0.23
AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein. 29 4.9
AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein. 29 4.9
BX842568-3|CAI40150.1| 1035|Homo sapiens family with sequence si... 29 6.5
AK125992-1|BAC86381.1| 910|Homo sapiens protein ( Homo sapiens ... 29 6.5
U97698-1|AAC51370.1| 421|Homo sapiens secretory mucin MUC6 prot... 29 8.5
EF623992-1|ABR25252.1| 354|Homo sapiens Uba6-specific E2 conjug... 29 8.5
BC016757-1|AAH16757.1| 220|Homo sapiens Sin3A-associated protei... 29 8.5
AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK092533-1|BAC03911.1| 325|Homo sapiens protein ( Homo sapiens ... 29 8.5
AF055993-1|AAC33316.1| 220|Homo sapiens mSin3A associated polyp... 29 8.5
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 33.9 bits (74), Expect = 0.23
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 323 SDIWFMHLGR-AAGGAKLPSAGLC*TPLRPKPA*PNPARICSLWSPESRE 177
S W HL A G P++ C TP P P P PA +CS SPE R+
Sbjct: 45 SHSWNQHLQAFAQPGTHFPTSN-C-TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 33.9 bits (74), Expect = 0.23
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 323 SDIWFMHLGR-AAGGAKLPSAGLC*TPLRPKPA*PNPARICSLWSPESRE 177
S W HL A G P++ C TP P P P PA +CS SPE R+
Sbjct: 45 SHSWNQHLQAFAQPGTHFPTSN-C-TPTPPTPVLPGPASLCSPASPELRQ 92
>AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein.
Length = 1032
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = -2
Query: 279 EATIRGIMLNASKAEASLAESGKDMLTVEP------RESGGSKQCDFTSRVSHSKRETRR 118
E +GI+ + A +++E D T P ESGGS+ D S+ S +ET
Sbjct: 660 ETRDKGIVDSERNAFKAISEKMTDFKTTPPVEVLHENESGGSEIKDIGSKYSEQSKETNG 719
Query: 117 RSPFG 103
P G
Sbjct: 720 SEPLG 724
>AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein.
Length = 1013
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = -2
Query: 279 EATIRGIMLNASKAEASLAESGKDMLTVEP------RESGGSKQCDFTSRVSHSKRETRR 118
E +GI+ + A +++E D T P ESGGS+ D S+ S +ET
Sbjct: 641 ETRDKGIVDSERNAFKAISEKMTDFKTTPPVEVLHENESGGSEIKDIGSKYSEQSKETNG 700
Query: 117 RSPFG 103
P G
Sbjct: 701 SEPLG 705
>BX842568-3|CAI40150.1| 1035|Homo sapiens family with sequence
similarity 47, member C protein.
Length = 1035
Score = 29.1 bits (62), Expect = 6.5
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 41 PDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECET-RLVKSH-CLEPPDSRGSTVSISL 214
P R R + + + P + R+S E ++ SH CLEPP +RGS +
Sbjct: 383 PKTRVPPLRPETPKNGVSPLFPEPPKTRISNLRSEPPKIGVSHLCLEPPKTRGSHLRPEP 442
Query: 215 PDSARLASALEAFSIIPRMVASHHRPLGRGA*TKCPK 325
P++ S L R+ + H P G CP+
Sbjct: 443 PETG--VSHLRPEPPKTRVSSLHLEPPETGVSHLCPE 477
>AK125992-1|BAC86381.1| 910|Homo sapiens protein ( Homo sapiens
cDNA FLJ44004 fis, clone TESTI4023546, weakly similar
to Sialidase (EC 3.2.1.18). ).
Length = 910
Score = 29.1 bits (62), Expect = 6.5
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +2
Query: 41 PDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECET-RLVKSH-CLEPPDSRGSTVSISL 214
P R R + + + P + R+S E ++ SH CLEPP +RGS +
Sbjct: 258 PKTRVPPLRPETPKNGVSPLFPEPPKTRISNLRSEPPKIGVSHLCLEPPKTRGSHLRPEP 317
Query: 215 PDSARLASALEAFSIIPRMVASHHRPLGRGA*TKCPK 325
P++ S L R+ + H P G CP+
Sbjct: 318 PETG--VSHLRPEPPKTRVSSLHLEPPETGVSHLCPE 352
>U97698-1|AAC51370.1| 421|Homo sapiens secretory mucin MUC6
protein.
Length = 421
Score = 28.7 bits (61), Expect = 8.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 194 STVSISLPDSARLASALEAFSIIPRMVASHH 286
STV++S S+ LAS+ AF PR AS H
Sbjct: 211 STVTVSPTPSSHLASSTIAFPSTPRTTASTH 241
>EF623992-1|ABR25252.1| 354|Homo sapiens Uba6-specific E2
conjugating enzyme 1 protein.
Length = 354
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -3
Query: 320 DIWFMHLGRAAGGAKLPSAGLC*TPLRPKPA*PNPARICSLWSP 189
D+W AAGGA P +GL P P A + A + S W P
Sbjct: 44 DVWAA--AAAAGGAGGPGSGLAPLPGLPPSAAAHGAALLSHWDP 85
>BC016757-1|AAH16757.1| 220|Homo sapiens Sin3A-associated protein,
30kDa protein.
Length = 220
Score = 28.7 bits (61), Expect = 8.5
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -3
Query: 299 GRAAG-GAKLPSAGLC*TPLRPKPA*PNPARICSLWSPESR--EALNNVTLLVAFRIQNA 129
G AG GA++P AG P A P P ++C L R A N + + +
Sbjct: 35 GTGAGTGAEVPGAGAVSAAGPPGAAGPGPGQLCCLREDGERCGRAAGNASFSKRIQKSIS 94
Query: 128 RRDVEAHLDRGDR 90
++ V+ LD+ R
Sbjct: 95 QKKVKIELDKSAR 107
>AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ39453 fis, clone PROST2010046, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 577
Score = 28.7 bits (61), Expect = 8.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 194 STVSISLPDSARLASALEAFSIIPRMVASHH 286
STV++S S+ LAS+ AF PR AS H
Sbjct: 367 STVTVSPTPSSHLASSTIAFPSTPRTTASTH 397
>AK092533-1|BAC03911.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ35214 fis, clone PROST1000512, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 325
Score = 28.7 bits (61), Expect = 8.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 194 STVSISLPDSARLASALEAFSIIPRMVASHH 286
STV++S S+ LAS+ AF PR AS H
Sbjct: 198 STVTVSPTPSSHLASSTIAFPSTPRTTASTH 228
>AF055993-1|AAC33316.1| 220|Homo sapiens mSin3A associated
polypeptide p30 protein.
Length = 220
Score = 28.7 bits (61), Expect = 8.5
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -3
Query: 299 GRAAG-GAKLPSAGLC*TPLRPKPA*PNPARICSLWSPESR--EALNNVTLLVAFRIQNA 129
G AG GA++P AG P A P P ++C L R A N + + +
Sbjct: 35 GTGAGTGAEVPGAGAVSAAGPPGAAGPGPGQLCCLREDGERCGRAAGNASFSKRIQKSIS 94
Query: 128 RRDVEAHLDRGDR 90
++ V+ LD+ R
Sbjct: 95 QKKVKIELDKSAR 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,864,049
Number of Sequences: 237096
Number of extensions: 1300482
Number of successful extensions: 3504
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3504
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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