Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0482
(340 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0350 + 2534422-2535615 31 0.30
12_02_0407 - 18654134-18654172,18654913-18655803 30 0.53
12_02_0969 - 24936399-24936699,24936779-24936949,24937032-249378... 29 1.2
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 29 1.2
12_02_0096 - 13573612-13573632,13573846-13573884,13574160-135744... 28 2.1
12_01_0801 + 7351171-7351198,7351383-7352020,7352098-7352559,735... 27 3.8
06_03_0262 + 18905352-18905481,18905570-18906003,18906082-189063... 27 3.8
06_02_0270 - 13613853-13614153,13614233-13614403,13614486-136153... 27 3.8
05_03_0466 - 14362190-14362312,14362411-14362658,14363289-14363664 27 3.8
03_05_0088 + 20664580-20664696,20664796-20665218,20665297-206655... 27 3.8
03_04_0157 + 17791540-17791681,17792809-17792908,17793386-177934... 27 3.8
02_03_0337 + 17898732-17899370,17899516-17899977,17900058-179006... 27 3.8
01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705 27 3.8
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 27 5.0
04_04_0564 - 26261199-26261508,26261605-26261697,26262150-262622... 27 5.0
04_03_0211 - 12694217-12694318,12695119-12695256,12695470-12695628 27 5.0
03_04_0008 - 16274158-16274458,16274791-16275623,16275706-162761... 27 5.0
02_02_0590 - 11894721-11895188,11895684-11895851 27 5.0
11_05_0087 + 18970741-18972702 26 6.6
04_03_0927 + 20871487-20871903,20872667-20872812,20873204-208733... 26 6.6
04_03_0789 + 19660713-19660896,19661405-19662027 26 6.6
03_04_0040 - 16730622-16730873,16731005-16731340 26 6.6
03_01_0563 + 4169144-4169516,4170362-4170648,4171339-4171576,417... 26 6.6
01_06_0456 + 29521282-29522064 26 6.6
12_01_0725 + 6428572-6428817 26 8.7
10_08_0888 - 21317163-21317687,21318044-21318153,21318258-21318408 26 8.7
10_01_0037 + 434995-436299 26 8.7
07_03_0436 - 18188221-18188373,18189121-18189233,18189817-181898... 26 8.7
06_03_0681 - 23480161-23480775 26 8.7
04_04_0964 - 29749624-29749649,29749742-29749945,29750036-297506... 26 8.7
04_04_0759 - 27832340-27832480,27832568-27832593,27832759-27834154 26 8.7
04_03_0473 - 16332870-16332947,16333013-16333474,16333615-163337... 26 8.7
04_01_0324 - 4305017-4305271,4305353-4305814,4305870-4306340 26 8.7
01_06_1389 - 36969414-36969436,36970027-36970394,36970474-369706... 26 8.7
>06_01_0350 + 2534422-2535615
Length = 397
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 170 PWNSNAQAEKKTLPGPLGGVFRP 102
PW S+A+ E+K LP PL +F P
Sbjct: 42 PWRSSARLERKLLPPPLPWLFLP 64
>12_02_0407 - 18654134-18654172,18654913-18655803
Length = 309
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 27 EPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIEGRY 191
E G+G ++++ PS+ +T P+ P R + CLS ++PI GRY
Sbjct: 115 EEGTGRLTLVNPSTGETLAVPPPPRLPPKRRHRRAPLVVSCLS--FGYHPITGRY 167
>12_02_0969 -
24936399-24936699,24936779-24936949,24937032-24937852,
24937946-24938407,24938486-24938890
Length = 719
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
VHP+P Q S HR C ++ VP
Sbjct: 248 VHPTPRAQHDTNPSHHRSSCASIEVP 273
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -1
Query: 235 IRTPPRMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGT 56
I+ P M S + + GFHG L+ KL PDL + HF LVF G
Sbjct: 188 IKLYPHM--SGEQKRLIEGAGFHGLVDLKCS-KLRPDLCSWLMEHFNPATNQLVFPGRGA 244
Query: 55 I 53
I
Sbjct: 245 I 245
>12_02_0096 -
13573612-13573632,13573846-13573884,13574160-13574493,
13574660-13574830,13574913-13575730,13575812-13576114,
13576352-13577085,13577174-13577303
Length = 849
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
VHP+P Q S HR C + +VP
Sbjct: 348 VHPTPRAQHDASPSQHRSSCASTKVP 373
>12_01_0801 +
7351171-7351198,7351383-7352020,7352098-7352559,
7352641-7353105
Length = 530
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 335 VHPTPRAQHDASPSQHRSSCASTEVP 360
>06_03_0262 +
18905352-18905481,18905570-18906003,18906082-18906303,
18906381-18906842,18906935-18907755,18907838-18908008,
18908088-18908347,18908453-18908508,18908786-18908824,
18909711-18909764
Length = 882
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 375 VHPTPRAQHDASPSQHRSSCSSTEVP 400
>06_02_0270 -
13613853-13614153,13614233-13614403,13614486-13615318,
13615401-13615746,13615940-13616127,13616238-13616408
Length = 669
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 194 VHPTPRAQHDTSPSQHRSSCASTEVP 219
>05_03_0466 - 14362190-14362312,14362411-14362658,14363289-14363664
Length = 248
Score = 27.1 bits (57), Expect = 3.8
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +3
Query: 6 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIEG 185
G V + PGSG V +IVP V G W R + F F + +E
Sbjct: 13 GCGVRVIVPGSGGVQVIVPGG--GGVHPGG-DWRRTTKSRRNR-FRFSARPEIKVAALEE 68
Query: 186 RYGS-EREEH 212
+GS E EEH
Sbjct: 69 EHGSGEEEEH 78
>03_05_0088 +
20664580-20664696,20664796-20665218,20665297-20665518,
20665597-20666058,20666140-20666300,20666422-20666973,
20667056-20667125,20667141-20667226,20667306-20667673,
20668002-20668018
Length = 825
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 367 VHPTPRAQHDASPSQHRSSCASTEVP 392
>03_04_0157 +
17791540-17791681,17792809-17792908,17793386-17793477,
17793562-17793620,17794135-17795637,17796478-17796720,
17796831-17797145,17797571-17797573,17798399-17798638,
17798975-17799259,17799335-17799556,17800105-17800266,
17800411-17800545,17802452-17802688,17802787-17802960,
17803692-17803934
Length = 1384
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 150 LSVRVPWN-PIEGRYGSE-REEHRIRGGVRILSADLEIQVRDVRGD 281
LSV +PW P E + E ++ HR + +++A + + +R V GD
Sbjct: 455 LSVILPWTRPFE--FVKEFKQAHRREDDIALVNAGMRVYIRKVEGD 498
>02_03_0337 +
17898732-17899370,17899516-17899977,17900058-17900688,
17900819-17900888,17900971-17901141,17901221-17901479,
17901918-17901956,17902900-17902914
Length = 761
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 326 VHPTPRAQHDASPSQHRSSCASTEVP 351
>01_05_0408 + 21888898-21890181,21891289-21891984,21892167-21893705
Length = 1172
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -2
Query: 291 PARHLHVHPSPEFQGPQRVSGHRRECGALRVPNHISLL*DSMELER 154
P+ H +H S P+R RR CGAL + + D + + R
Sbjct: 18 PSHHRLLHRSSLLPFPRRHHHRRRRCGALSIARASASAKDGVTVRR 63
>05_07_0112 - 27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -3
Query: 170 PWNSNAQAEKKTLPGPLGGVFRPLWVTPSNTRF*RRGNDY*N-GSAAGFRNRNR 12
P + A+ +++T P G + W+TPSN R R G + G + G R+R+R
Sbjct: 1578 PRYTPAKTKQETEPMGTGFDRQETWLTPSNGRGGRGGRGRGSRGGSRGGRSRSR 1631
>04_04_0564 -
26261199-26261508,26261605-26261697,26262150-26262295,
26262400-26262720,26263184-26263272,26263466-26263654,
26265546-26265804
Length = 468
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 322 LGDLLRIWVRTGATSPRTSLT*ISRSAESIRTPPRM 215
+G LRIWV +G T R +T S +++ PR+
Sbjct: 356 MGAGLRIWVYSGDTDGRVPVTSTRYSLNTMKLRPRL 391
>04_03_0211 - 12694217-12694318,12695119-12695256,12695470-12695628
Length = 132
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 331 AIHLGDLLRIWVRTGATSPRTSLT*ISRSAESIRTPPRMRCSSRSEP 191
A H G I VRT + TS + A SI TP + CS+ + P
Sbjct: 38 ARHTGPRSHIAVRTCHVNDETSRSTCRNGATSIATPSVVACSALALP 84
>03_04_0008 -
16274158-16274458,16274791-16275623,16275706-16276167,
16276245-16276882,16277068-16277197
Length = 787
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
VHP+P Q S HR C + VP
Sbjct: 369 VHPTPRAQYDASPSQHRSSCASTEVP 394
>02_02_0590 - 11894721-11895188,11895684-11895851
Length = 211
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 54 IVPSSLKTSVRRGNPKWPEDAAERSGKSFLFCL 152
++ S + V GN P +E+ G ++L CL
Sbjct: 70 VIQSPINLQVEHGNDLTPTSVSEKPGNNYLPCL 102
>11_05_0087 + 18970741-18972702
Length = 653
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 156 VRVPWNPIEGRYGSEREEHR 215
VR P P+ GR+G RE R
Sbjct: 56 VRAPRRPLHGRHGHHREHRR 75
>04_03_0927 + 20871487-20871903,20872667-20872812,20873204-20873301,
20873378-20873572,20873670-20873797,20873892-20874050,
20875119-20875223,20875449-20875559,20875653-20875790,
20875909-20876091,20876362-20876517,20876615-20876738,
20876820-20877030,20877614-20877729,20877828-20878053,
20878218-20878311,20879198-20879275,20879822-20879971,
20880086-20880292,20880584-20880788,20880990-20881096
Length = 1117
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -3
Query: 329 YSPWRPAADMGXNRRDISTYIPHLNFKVRREYPDTAANAVLFAFRTISPFYRIPWNS 159
+SP R + + RD+ T L KV +Y +N + A R Y I W +
Sbjct: 834 WSPVRDNDERSADMRDLMTSFSALEEKVLEQYTFAKSNLIRNAARNYLLDYGIHWGA 890
>04_03_0789 + 19660713-19660896,19661405-19662027
Length = 268
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 6 GNPVPIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAERSGK 134
G P P+P GSG+ + S+ S WP +ER K
Sbjct: 225 GPPSPMPSSGSGSATAAASSTTSAS---SPGAWPYGGSERKKK 264
>03_04_0040 - 16730622-16730873,16731005-16731340
Length = 195
Score = 26.2 bits (55), Expect = 6.6
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +2
Query: 188 IWFGTRRAPHSRRCPDTLCGP*NSGEGCTWRCRAG-SXPYPQ-QVSKVNS 331
+W G R P RC D +G G CR G S P+ VS VNS
Sbjct: 128 VWVGLERRPGVERCRDG--EKEEAGGGARVHCRGGESGERPEAAVSPVNS 175
>03_01_0563 +
4169144-4169516,4170362-4170648,4171339-4171576,
4172473-4172796,4172914-4172999,4173124-4173231,
4173315-4173619,4173733-4173960,4174109-4174877
Length = 905
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 241 ESIRTPPRMRCSSRSEPYLPSIGFHGTRTLRQK 143
+S R P R ++PYLPS G R LR+K
Sbjct: 205 QSTRELPTKRVFFSNKPYLPSETPPGLRELREK 237
>01_06_0456 + 29521282-29522064
Length = 260
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 157 TLRQKRKLFPDLSAASSGHFGLPRRTL 77
TLR+ ++FP +S++ G FG+ R L
Sbjct: 171 TLRRHHQVFPHISSSCQGCFGVRRYIL 197
>12_01_0725 + 6428572-6428817
Length = 81
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 285 RHLHVHPSPEFQGPQRVSGHRRECGALRVPN 193
R L V PSP + SGHR E A PN
Sbjct: 44 RALQVRPSPVVEPSGCCSGHRSEAVASWCPN 74
>10_08_0888 -
21317163-21317687,21318044-21318153,21318258-21318408
Length = 261
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 47 NGSAAGFRNRNRIPF 3
NG A GF+N N+ PF
Sbjct: 50 NGGACGFKNTNQYPF 64
>10_01_0037 + 434995-436299
Length = 434
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 209 APHSRRCPDTLCGP*NSGEGCTWRCRAGSXPY 304
AP RRC D P WRCR + PY
Sbjct: 262 APLGRRCTDFQLLP-----AALWRCRTAALPY 288
>07_03_0436 -
18188221-18188373,18189121-18189233,18189817-18189889,
18189979-18190046,18190132-18190372,18191614-18191732,
18192977-18193028,18193178-18193192
Length = 277
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 3 KGNPVPIPEPGSGTVSIIVPSSLKTSVRRGNP 98
+G+P+P+ P SG + S + RRG P
Sbjct: 160 RGSPMPVSSPWSGGALVENNDSSASRKRRGGP 191
>06_03_0681 - 23480161-23480775
Length = 204
Score = 25.8 bits (54), Expect = 8.7
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -1
Query: 250 RSAESIRTPPRMRCSSRSEPYLPS-IGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLV 74
R A P R++ + + P S + T T+RQ+++L SAA++G P +
Sbjct: 80 REARRGAPPVRVKARALNRPAGGSAVSVSVTATMRQQQQLASPSSAAAAGPSPSPSTGFL 139
Query: 73 FKD 65
F D
Sbjct: 140 FND 142
>04_04_0964 -
29749624-29749649,29749742-29749945,29750036-29750634,
29750742-29750826,29750914-29751562,29751568-29751643,
29753891-29753957,29754097-29754998,29756579-29756790
Length = 939
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 181 SIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDE 62
S G H L K+ L+AASSG LP VF ++
Sbjct: 22 SRGCHHVNVLPMSGKIMLPLTAASSGSVALPCDAPVFTEK 61
>04_04_0759 - 27832340-27832480,27832568-27832593,27832759-27834154
Length = 520
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 306 GYGXEPARHLHVHPSPEFQGPQRVSGHRRECGALRVP 196
G+ EP L HPSP+ GPQ ++ G P
Sbjct: 23 GFRFEPKEELVEHPSPQ-PGPQAIASIASSDGEFSSP 58
>04_03_0473 -
16332870-16332947,16333013-16333474,16333615-16333739,
16333953-16334022
Length = 244
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
VHP P Q S HR C + VP
Sbjct: 178 VHPIPRAQHDASPSQHRSSCASTEVP 203
>04_01_0324 - 4305017-4305271,4305353-4305814,4305870-4306340
Length = 395
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
VHP+P Q S HR C VP
Sbjct: 270 VHPTPRAQHDASPSQHRSSCAFTEVP 295
>01_06_1389 -
36969414-36969436,36970027-36970394,36970474-36970644,
36970727-36971559,36971642-36972103,36972182-36972915,
36973004-36973133
Length = 906
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 273 VHPSPEFQGPQRVSGHRRECGALRVP 196
+HP+P Q S HR C + VP
Sbjct: 401 MHPTPRAQHDPSPSQHRSSCASTEVP 426
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,535,589
Number of Sequences: 37544
Number of extensions: 230229
Number of successful extensions: 840
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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