Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0482
(340 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 0.57
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 0.57
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 1.8
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 2.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 2.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 3.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 3.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 3.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 3.1
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 4.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 4.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 5.4
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 20 9.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.8 bits (49), Expect = 0.57
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Frame = +3
Query: 96 PKW---PEDAA-ERSGKSFLFCLSVRVP-----WNPIEGRYGSEREEHRIRGGVRILS 242
P+W P D + ER+ L C + VP W G E EE R R +ILS
Sbjct: 710 PRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILS 767
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.8 bits (49), Expect = 0.57
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Frame = +3
Query: 96 PKW---PEDAA-ERSGKSFLFCLSVRVP-----WNPIEGRYGSEREEHRIRGGVRILS 242
P+W P D + ER+ L C + VP W G E EE R R +ILS
Sbjct: 706 PRWIVEPTDVSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILS 763
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 1.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 130 PDLSAASSGHFGLPRRTLVFK 68
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 2.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -1
Query: 199 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 116
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 2.3
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -1
Query: 310 LRIWVRTGATSPRTSLT*ISRSAESIRTP 224
++ W+ G T + +S+ +++RTP
Sbjct: 513 IKEWIERGTTKSMEAANIMSKLPKTVRTP 541
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = +2
Query: 236 TLCGP*----NSGEGCTWRCRAGSXPYPQQVSK 322
T CGP + GCT R P+P +V+K
Sbjct: 428 TNCGPNPCTHTTTNGCTAELRKKEPPHPIRVAK 460
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = +2
Query: 236 TLCGP*----NSGEGCTWRCRAGSXPYPQQVSK 322
T CGP + GCT R P+P +V+K
Sbjct: 414 TNCGPNPCTHTTTNGCTAELRKKEPPHPIRVAK 446
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = +2
Query: 236 TLCGP*----NSGEGCTWRCRAGSXPYPQQVSK 322
T CGP + GCT R P+P +V+K
Sbjct: 448 TNCGPNPCTHTTTNGCTAELRKKEPPHPIRVAK 480
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 3.1
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Frame = +2
Query: 236 TLCGP*----NSGEGCTWRCRAGSXPYPQQVSK 322
T CGP + GCT R P+P +V+K
Sbjct: 397 TNCGPNPCTHTTTNGCTAELRKKEPPHPIRVAK 429
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 176 RIPWNSNAQAEKKTLPGPLG 117
+IPW+ N +A K G G
Sbjct: 334 QIPWDKNVEALAKWANGQTG 353
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 4.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 85 DGVTQSGLKTPPRGPG 132
DG L +PPR PG
Sbjct: 128 DGPPSVSLSSPPREPG 143
Score = 20.6 bits (41), Expect = 5.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 78 SFLKTRERLLKRFRCRVPE 22
S LKT ++L + C VPE
Sbjct: 107 SLLKTADQLKIKGLCEVPE 125
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 112 TPPRGPGRV 138
+PPRGPG V
Sbjct: 397 SPPRGPGGV 405
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 19.8 bits (39), Expect = 9.4
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = +3
Query: 81 VRRGNPKWPEDAAERSGK 134
VRR +P W + E+ K
Sbjct: 169 VRREHPFWDDQRVEQEAK 186
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,914
Number of Sequences: 438
Number of extensions: 2579
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7715466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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