Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0478
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    25   1.7  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   2.2  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   6.8  

>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 258 MSFLRYPLILWITVLPPLSELIP 190
           M+ +RY  +LW+ +L  +S L+P
Sbjct: 1   MAPVRYHFVLWLLILIGVSSLVP 23


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 19/65 (29%), Positives = 27/65 (41%)
 Frame = +2

Query: 416 PGSSLVRSPVPTLPLTGYLSAFLPSGSVALSIAHAVGISVRCRSFAPSWAVCTNPPFSPT 595
           P +  VRS  P LP  G     +PS +  + ++ A  +  +  S  P       PPF P 
Sbjct: 71  PQAVTVRSSAPMLPKGGLPPKGVPSSASPVYMSPASSLMTKATSL-PLGV----PPFRPI 125

Query: 596 AAPYP 610
             P P
Sbjct: 126 PKPTP 130


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 64  ETCRASCINESANARGEAVC 123
           + CR S  +E  + RG+ VC
Sbjct: 549 DACRMSNASEECSGRGQCVC 568


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,356
Number of Sequences: 2352
Number of extensions: 15101
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)