Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0478
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA seq... 35 0.31
AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcriptio... 35 0.31
AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein. 35 0.31
Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase w... 33 0.72
X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2 pr... 33 0.72
BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein. 32 2.2
BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein. 32 2.2
AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein. 32 2.2
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 2.9
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 2.9
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 2.9
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 2.9
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 31 2.9
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 2.9
AL391688-3|CAI41009.1| 465|Homo sapiens sushi-repeat-containing... 30 6.7
AL035608-3|CAI42847.1| 465|Homo sapiens sushi-repeat-containing... 30 6.7
AF393649-1|AAM73693.1| 465|Homo sapiens sushi-repeat containing... 30 6.7
AF060567-1|AAC15765.1| 465|Homo sapiens sushi-repeat protein pr... 30 6.7
BC107864-1|AAI07865.1| 385|Homo sapiens ZC3H13 protein protein. 30 8.8
BC032425-1|AAH32425.1| 469|Homo sapiens ZC3H13 protein protein. 30 8.8
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 30 8.8
AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein pr... 30 8.8
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 30 8.8
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 30 8.8
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 30 8.8
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 30 8.8
>BX247885-5|CAI95721.1| 1960|Homo sapiens protein ( Human DNA
sequence from clone RP4-669P10 on chromosome
22q13.31-13.33. ).
Length = 1960
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = -1
Query: 610 RIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYRKRHASRREKGGQVSGKRQGRNRRAH 431
R+ + G ++G + PA ++RP N S+ GG G + G N H
Sbjct: 616 RVEKPGGQDKGSQEDDPAATQRPPSNGGAKETSHASLPQPEPPGGGGSKGNKNGDNNSNH 675
Query: 430 EGASRGK 410
G G+
Sbjct: 676 NGEGNGQ 682
>AL031346-1|CAB42440.1| 1641|Homo sapiens dJ597B2.1 (transcription
factor 20 (AR1, KIAA0292)) protein.
Length = 1641
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = -1
Query: 610 RIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYRKRHASRREKGGQVSGKRQGRNRRAH 431
R+ + G ++G + PA ++RP N S+ GG G + G N H
Sbjct: 372 RVEKPGGQDKGSQEDDPAATQRPPSNGGAKETSHASLPQPEPPGGGGSKGNKNGDNNSNH 431
Query: 430 EGASRGK 410
G G+
Sbjct: 432 NGEGNGQ 438
>AB006630-1|BAA22961.1| 1716|Homo sapiens KIAA0292 protein.
Length = 1716
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = -1
Query: 610 RIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYRKRHASRREKGGQVSGKRQGRNRRAH 431
R+ + G ++G + PA ++RP N S+ GG G + G N H
Sbjct: 372 RVEKPGGQDKGSQEDDPAATQRPPSNGGAKETSHASLPQPEPPGGGGSKGNKNGDNNSNH 431
Query: 430 EGASRGK 410
G G+
Sbjct: 432 NGEGNGQ 438
>Z48615-1|CAA88531.1| 953|Homo sapiens serine/threonine kinase with
SH3 domain, leucine zipper domain and proline rich
protein.
Length = 953
Score = 33.5 bits (73), Expect = 0.72
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -3
Query: 482 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGXTPAT 303
ER G+ GS+Q S+ G++P + GFA+ + +F +A GG + +P +
Sbjct: 573 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 630
Query: 302 RPFYGSWP 279
P Y S P
Sbjct: 631 TPSYLSVP 638
>X90846-1|CAA62351.1| 954|Homo sapiens mixed lineage kinase 2
protein.
Length = 954
Score = 33.5 bits (73), Expect = 0.72
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -3
Query: 482 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGXTPAT 303
ER G+ GS+Q S+ G++P + GFA+ + +F +A GG + +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631
Query: 302 RPFYGSWP 279
P Y S P
Sbjct: 632 TPSYLSVP 639
>BC064495-1|AAH64495.1| 299|Homo sapiens RCOR1 protein protein.
Length = 299
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 484 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 356
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>BC051003-1|AAH51003.1| 293|Homo sapiens RCOR1 protein protein.
Length = 293
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 484 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 356
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>AF155595-1|AAF01498.1| 482|Homo sapiens CoREST protein protein.
Length = 482
Score = 31.9 bits (69), Expect = 2.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 484 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT*AS 356
EKG +VSGKR+GRN A ++ + +C SP T AS
Sbjct: 3 EKGPEVSGKRRGRNNAAASASAAAASAAASAAC-ASPAATAAS 44
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = -1
Query: 637 PGWTQDDSYRIRRSGRAERGVRAH--SPAWSERPTPN*DTYSVSYRKRHASRREKGGQVS 464
PGW++ + + R R+ R R+H SPA R R R +RR +
Sbjct: 540 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTP 599
Query: 463 GKRQGRNRR-AHEGASRGK 410
+R+ R+R A G SR +
Sbjct: 600 TRRRSRSRTPARRGRSRSR 618
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = -1
Query: 637 PGWTQDDSYRIRRSGRAERGVRAH--SPAWSERPTPN*DTYSVSYRKRHASRREKGGQVS 464
PGW++ + + R R+ R R+H SPA R R R +RR +
Sbjct: 540 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTP 599
Query: 463 GKRQGRNRR-AHEGASRGK 410
+R+ R+R A G SR +
Sbjct: 600 TRRRSRSRTPARRGRSRSR 618
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = -1
Query: 637 PGWTQDDSYRIRRSGRAERGVRAH--SPAWSERPTPN*DTYSVSYRKRHASRREKGGQVS 464
PGW++ + + R R+ R R+H SPA R R R +RR +
Sbjct: 540 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTP 599
Query: 463 GKRQGRNRR-AHEGASRGK 410
+R+ R+R A G SR +
Sbjct: 600 TRRRSRSRTPARRGRSRSR 618
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = -1
Query: 637 PGWTQDDSYRIRRSGRAERGVRAH--SPAWSERPTPN*DTYSVSYRKRHASRREKGGQVS 464
PGW++ + + R R+ R R+H SPA R R R +RR +
Sbjct: 505 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTP 564
Query: 463 GKRQGRNRR-AHEGASRGK 410
+R+ R+R A G SR +
Sbjct: 565 TRRRSRSRTPARRGRSRSR 583
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = -1
Query: 637 PGWTQDDSYRIRRSGRAERGVRAH--SPAWSERPTPN*DTYSVSYRKRHASRREKGGQVS 464
PGW++ + + R R+ R R+H SPA R R R +RR +
Sbjct: 330 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTP 389
Query: 463 GKRQGRNRR-AHEGASRGK 410
+R+ R+R A G SR +
Sbjct: 390 TRRRSRSRTPARRGRSRSR 408
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.5 bits (68), Expect = 2.9
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Frame = -1
Query: 637 PGWTQDDSYRIRRSGRAERGVRAH--SPAWSERPTPN*DTYSVSYRKRHASRREKGGQVS 464
PGW++ + + R R+ R R+H SPA R R R +RR +
Sbjct: 588 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTP 647
Query: 463 GKRQGRNRR-AHEGASRGK 410
+R+ R+R A G SR +
Sbjct: 648 TRRRSRSRTPARRGRSRSR 666
>AL391688-3|CAI41009.1| 465|Homo sapiens sushi-repeat-containing
protein, X-linked 2 protein.
Length = 465
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +3
Query: 228 TESGDNAGKTCEQKAS---KRPGTVKRP-RCWRXSIGSAPLTSITKIDAQVR--GGETRQ 389
T +GDN G TCE R GT R + R GS P+ + KI+ V G Q
Sbjct: 278 TSAGDNYGATCEYHCDGGYDRQGTPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQ 337
Query: 390 DYKDTRRFPLEAP 428
Y+ R + AP
Sbjct: 338 FYEKQRLLIISAP 350
>AL035608-3|CAI42847.1| 465|Homo sapiens sushi-repeat-containing
protein, X-linked 2 protein.
Length = 465
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +3
Query: 228 TESGDNAGKTCEQKAS---KRPGTVKRP-RCWRXSIGSAPLTSITKIDAQVR--GGETRQ 389
T +GDN G TCE R GT R + R GS P+ + KI+ V G Q
Sbjct: 278 TSAGDNYGATCEYHCDGGYDRQGTPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQ 337
Query: 390 DYKDTRRFPLEAP 428
Y+ R + AP
Sbjct: 338 FYEKQRLLIISAP 350
>AF393649-1|AAM73693.1| 465|Homo sapiens sushi-repeat containing
protein protein.
Length = 465
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +3
Query: 228 TESGDNAGKTCEQKAS---KRPGTVKRP-RCWRXSIGSAPLTSITKIDAQVR--GGETRQ 389
T +GDN G TCE R GT R + R GS P+ + KI+ V G Q
Sbjct: 278 TSAGDNYGATCEYHCDGGYDRQGTPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQ 337
Query: 390 DYKDTRRFPLEAP 428
Y+ R + AP
Sbjct: 338 FYEKQRLLIISAP 350
>AF060567-1|AAC15765.1| 465|Homo sapiens sushi-repeat protein
protein.
Length = 465
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +3
Query: 228 TESGDNAGKTCEQKAS---KRPGTVKRP-RCWRXSIGSAPLTSITKIDAQVR--GGETRQ 389
T +GDN G TCE R GT R + R GS P+ + KI+ V G Q
Sbjct: 278 TSAGDNYGATCEYHCDGGYDRQGTPSRVCQSSRQWSGSPPICAPMKINVNVNSAAGLLDQ 337
Query: 390 DYKDTRRFPLEAP 428
Y+ R + AP
Sbjct: 338 FYEKQRLLIISAP 350
>BC107864-1|AAI07865.1| 385|Homo sapiens ZC3H13 protein protein.
Length = 385
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 536 RCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 658
R R+ +PS+ PP +A+PYP + SP R + RH
Sbjct: 68 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 108
>BC032425-1|AAH32425.1| 469|Homo sapiens ZC3H13 protein protein.
Length = 469
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 536 RCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 658
R R+ +PS+ PP +A+PYP + SP R + RH
Sbjct: 98 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 138
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 536 RCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 658
R R+ +PS+ PP +A+PYP + SP R + RH
Sbjct: 351 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 391
>AL831833-1|CAD38544.1| 796|Homo sapiens hypothetical protein
protein.
Length = 796
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 536 RCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 658
R R+ +PS+ PP +A+PYP + SP R + RH
Sbjct: 176 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 216
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 536 RCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 658
R R+ +PS+ PP +A+PYP + SP R + RH
Sbjct: 351 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 391
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 536 RCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 658
R R+ +PS+ PP +A+PYP + SP R + RH
Sbjct: 351 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 391
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 536 RCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 658
R R+ +PS+ PP +A+PYP + SP R + RH
Sbjct: 351 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 391
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 536 RCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRH 658
R R+ +PS+ PP +A+PYP + SP R + RH
Sbjct: 351 RKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRH 391
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,942,955
Number of Sequences: 237096
Number of extensions: 2599204
Number of successful extensions: 12543
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12539
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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