Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0478
         (685 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g50230.1 68416.m05493 leucine-rich repeat transmembrane prote...    29   2.2  
At5g07390.1 68418.m00846 respiratory burst oxidase protein A (Rb...    29   2.9  
At5g45050.2 68418.m05524 disease resistance protein-related simi...    29   3.8  
At5g45050.1 68418.m05523 disease resistance protein-related simi...    29   3.8  
At5g19600.1 68418.m02333 sulfate transporter, putative similar t...    29   3.8  
At4g32020.1 68417.m04558 expressed protein NuLL                        29   3.8  
At4g04490.1 68417.m00651 protein kinase family protein contains ...    28   5.0  
At5g59130.1 68418.m07411 subtilase family protein contains simil...    28   6.6  
At5g36870.1 68418.m04417 glycosyl transferase family 48 protein ...    28   6.6  
At5g01180.1 68418.m00022 proton-dependent oligopeptide transport...    27   8.8  
At3g15990.1 68416.m02023 sulfate transporter, putative similar t...    27   8.8  
At1g30650.1 68414.m03748 WRKY family transcription factor contai...    27   8.8  

>At3g50230.1 68416.m05493 leucine-rich repeat transmembrane protein
           kinase, putative receptor-like protein kinase (RKL1),
           Arabidopsis thaliana, EMBL:AF084034
          Length = 660

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 428 LVRSPVPTLPLTGYLSAFLPSGSVAL 505
           L+R    +LP T Y  +FLPS +VAL
Sbjct: 15  LLRISTASLPATNYFDSFLPSDAVAL 40


>At5g07390.1 68418.m00846 respiratory burst oxidase protein A
           (RbohA) / NADPH oxidase identical to respiratory burst
           oxidase protein A from Arabidopsis thaliana [gi:3242781]
          Length = 902

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 329 RPPDEHHKNRRSSQRW 376
           RPPDEH  NR  S+ W
Sbjct: 667 RPPDEHRLNRADSKHW 682


>At5g45050.2 68418.m05524 disease resistance protein-related similar
            to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
            profiles PF03106: WRKY DNA -binding domain, PF00931:
            NB-ARC domain, PF00560: Leucine Rich Repeat
          Length = 1344

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 139  PLPRSLTRCARSFGCGERYQLTQRR 213
            P PRS  RCA S GC  R Q+ + R
Sbjct: 1169 PYPRSYYRCASSKGCFARKQVERSR 1193


>At5g45050.1 68418.m05523 disease resistance protein-related similar
            to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
            profiles PF03106: WRKY DNA -binding domain, PF00931:
            NB-ARC domain, PF00560: Leucine Rich Repeat
          Length = 1372

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 139  PLPRSLTRCARSFGCGERYQLTQRR 213
            P PRS  RCA S GC  R Q+ + R
Sbjct: 1197 PYPRSYYRCASSKGCFARKQVERSR 1221


>At5g19600.1 68418.m02333 sulfate transporter, putative similar to
           sulfate transporter [Arabidopsis thaliana] GI:2285885;
           contains Pfam profiles PF00916: Sulfate transporter
           family, PF01740: STAS domain; supporting cDNA
           gi|14141683|dbj|AB061739.1|
          Length = 634

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -2

Query: 330 RSLWKXASNAAFLRFLAFCWPFAHMSFLRYPLILWITVLPPL 205
           R+ WK  S  A + FL F     ++   RYP + W++ + P+
Sbjct: 235 RAEWKWQSTLAGVCFLVFLQSTRYIK-QRYPKLFWVSAMGPM 275


>At4g32020.1 68417.m04558 expressed protein NuLL
          Length = 181

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
 Frame = +2

Query: 326 LRPPDEHHKNRRSSQ----RWRNPTGL*RYQAFPPGSSLVRS---PV--PTLPLTGYLSA 478
           L+ P  H K  R+      R +      R +  PP S   RS   PV  P  P    +SA
Sbjct: 12  LKDPFSHMKQHRNPSACPNRQKKTVSNNRTRRSPPRSQSSRSSSPPVAPPLPPPRAAVSA 71

Query: 479 FLPSGSVALSIAHAVGIS 532
           F+P G++  S+++ V +S
Sbjct: 72  FVPKGTLKKSLSNTVAVS 89


>At4g04490.1 68417.m00651 protein kinase family protein contains
           Pfam PF00069: Protein kinase domain
          Length = 658

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +3

Query: 285 GTVKRPRC---WRXSIGSAPLTSITKIDAQVRGGETRQDYK 398
           GTV RP C   W     +    ++ ++ A  R  +TRQDY+
Sbjct: 230 GTVARPSCYFRWDDYRFAGAFDNLERVPAPPRSPQTRQDYR 270


>At5g59130.1 68418.m07411 subtilase family protein contains
           similarity to prepro-cucumisin GI:807698 from [Cucumis
           melo]
          Length = 732

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 461 TGYLSAFLPSGSVALSIAHAVGISVRCRSFAPSWA 565
           T Y+   + SG+ ++S  HA G++   ++F P W+
Sbjct: 502 TAYVKYSVESGT-SMSCPHAAGVAAYVKTFHPQWS 535


>At5g36870.1 68418.m04417 glycosyl transferase family 48 protein
           contains Pfam profile: PF02364 1,3-beta-glucan synthase
          Length = 1862

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 309 SNAAFLRFLAFCWPFAHMSFLRYPLILWITVLP 211
           SN      L  CW +  + F+R+P+ L  + +P
Sbjct: 813 SNRELELLLMSCWAYPDLDFIRWPIFLLASKIP 845


>At5g01180.1 68418.m00022 proton-dependent oligopeptide transport
           (POT) family protein contains Pfam profile: PF00854 POT
           family
          Length = 570

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 339 SGGRSLWKXASNAAFLRFLAFCWPFAHMSFLRYPLILWI 223
           SGGR  W  A N        F W  A +SFL + + LWI
Sbjct: 519 SGGRPGW-IAKNLNNGHLDYFFWLLAGLSFLNFLVYLWI 556


>At3g15990.1 68416.m02023 sulfate transporter, putative similar to
           sulfate transporter [Arabidopsis thaliana] GI:2285885;
           contains Pfam profiles PF00916: Sulfate transporter
           family, PF01740: STAS domain
          Length = 653

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 330 RSLWKXASNAAFLRFLAFCWPFAHMSFLRYPLILWITVLPPLSELI 193
           RS W   +    + FL+      H+S +R P + WI+   PL+ +I
Sbjct: 247 RSEWSWETIVMGIGFLSILLTTRHIS-MRKPKLFWISAASPLASVI 291


>At1g30650.1 68414.m03748 WRKY family transcription factor contains
           Pfam profile: PF03106 WRKY DNA -binding domain
          Length = 430

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 139 PLPRSLTRCARSFGCGERYQLTQRR 213
           P PR   RC+ S GC  R Q+ + R
Sbjct: 234 PFPRGYYRCSSSKGCSARKQVERSR 258


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,526,587
Number of Sequences: 28952
Number of extensions: 345351
Number of successful extensions: 1060
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)