Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0475
         (523 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81490-1|AAA28727.1|  449|Drosophila melanogaster neuropeptide r...    29   5.1  
BT015303-1|AAT94531.1|  464|Drosophila melanogaster AT16733p pro...    29   5.1  
AY095061-1|AAM11389.1| 1158|Drosophila melanogaster LP03070p pro...    29   5.1  
AF236106-1|AAF36990.1| 1701|Drosophila melanogaster receptor pro...    29   5.1  
AE014297-4047|AAF56655.3|  464|Drosophila melanogaster CG5811-PA...    29   5.1  
AE013599-2319|AAF57973.1| 1701|Drosophila melanogaster CG8250-PA...    29   5.1  

>M81490-1|AAA28727.1|  449|Drosophila melanogaster neuropeptide
           receptor protein.
          Length = 449

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 360 VTFCSSDYFL*SKNSFNFYIFKFINYMC*DLFFLF--ISRNSLSYIYYKSP 506
           + F   DY L S++ ++   FK I YM     F+F  I   ++ YI Y +P
Sbjct: 69  MNFSCDDYDLLSEDMWSSAYFKIIVYMLYIPIFIFALIGNGTVCYIVYSTP 119


>BT015303-1|AAT94531.1|  464|Drosophila melanogaster AT16733p
           protein.
          Length = 464

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 360 VTFCSSDYFL*SKNSFNFYIFKFINYMC*DLFFLF--ISRNSLSYIYYKSP 506
           + F   DY L S++ ++   FK I YM     F+F  I   ++ YI Y +P
Sbjct: 84  MNFSCDDYDLLSEDMWSSAYFKIIVYMLYIPIFIFALIGNGTVCYIVYSTP 134


>AY095061-1|AAM11389.1| 1158|Drosophila melanogaster LP03070p
           protein.
          Length = 1158

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 322 GWASNSNYALLGGLRSVAQTISYEVRIALIFISSNLLIICVEIYFFYLY 468
           GW+   +      +R  A   S++  ++++ IS  +L IC+    F LY
Sbjct: 537 GWSLKRDNHTACEIREEAGKSSFQYLVSILMISLAVLFICIAALIFMLY 585


>AF236106-1|AAF36990.1| 1701|Drosophila melanogaster receptor protein
            tyrosine kinaseALK splice variant A protein.
          Length = 1701

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 322  GWASNSNYALLGGLRSVAQTISYEVRIALIFISSNLLIICVEIYFFYLY 468
            GW+   +      +R  A   S++  ++++ IS  +L IC+    F LY
Sbjct: 1080 GWSLKRDNHTACEIREEAGKSSFQYLVSILMISLAVLFICIAALIFMLY 1128


>AE014297-4047|AAF56655.3|  464|Drosophila melanogaster CG5811-PA
           protein.
          Length = 464

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 360 VTFCSSDYFL*SKNSFNFYIFKFINYMC*DLFFLF--ISRNSLSYIYYKSP 506
           + F   DY L S++ ++   FK I YM     F+F  I   ++ YI Y +P
Sbjct: 84  MNFSCDDYDLLSEDMWSSAYFKIIVYMLYIPIFIFALIGNGTVCYIVYSTP 134


>AE013599-2319|AAF57973.1| 1701|Drosophila melanogaster CG8250-PA
            protein.
          Length = 1701

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 322  GWASNSNYALLGGLRSVAQTISYEVRIALIFISSNLLIICVEIYFFYLY 468
            GW+   +      +R  A   S++  ++++ IS  +L IC+    F LY
Sbjct: 1080 GWSLKRDNHTACEIREEAGKSSFQYLVSILMISLAVLFICIAALIFMLY 1128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,986,073
Number of Sequences: 53049
Number of extensions: 210037
Number of successful extensions: 377
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 377
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)