Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0473
         (697 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023953-1|ABB36457.1|  509|Drosophila melanogaster GH08757p pro...    31   1.1  
U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensit...    29   6.0  
AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p pro...    29   6.0  
AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA...    29   6.0  
AY061151-1|AAL28699.1|  948|Drosophila melanogaster LD12377p pro...    29   8.0  
AE014297-3194|AAX52971.1|  993|Drosophila melanogaster CG31156-P...    29   8.0  
AE014297-3193|AAF56028.3|  948|Drosophila melanogaster CG31156-P...    29   8.0  

>BT023953-1|ABB36457.1|  509|Drosophila melanogaster GH08757p
           protein.
          Length = 509

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 19/77 (24%), Positives = 34/77 (44%)
 Frame = -2

Query: 393 HLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLERITREF*TATSVSA 214
           +L  + F P+ P   +  A        Y+ +  P  + +PP S   ++      ATS ++
Sbjct: 423 NLVHSHFLPYVPTTTASTATATNAIATYAASATPSPTPTPPPSAGHQLPMGHANATSTTS 482

Query: 213 TSPLCTLGTKHRAPADI 163
           T+   T  T + +PA I
Sbjct: 483 TANTTTTTTTYVSPAGI 499


>U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensitive
           serotonin transporterprotein.
          Length = 622

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 183 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 79
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 183 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 79
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -2

Query: 183 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 79
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AY061151-1|AAL28699.1|  948|Drosophila melanogaster LD12377p
           protein.
          Length = 948

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 543 SALPIIANKIRQALDCSPIKRERELGLD 626
           +A+ + A  ++Q L  SP+K ER LG+D
Sbjct: 505 AAIDVFAKNLKQLLLISPLKGERILGID 532


>AE014297-3194|AAX52971.1|  993|Drosophila melanogaster CG31156-PB,
           isoform B protein.
          Length = 993

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 543 SALPIIANKIRQALDCSPIKRERELGLD 626
           +A+ + A  ++Q L  SP+K ER LG+D
Sbjct: 505 AAIDVFAKNLKQLLLISPLKGERILGID 532


>AE014297-3193|AAF56028.3|  948|Drosophila melanogaster CG31156-PA,
           isoform A protein.
          Length = 948

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 543 SALPIIANKIRQALDCSPIKRERELGLD 626
           +A+ + A  ++Q L  SP+K ER LG+D
Sbjct: 505 AAIDVFAKNLKQLLLISPLKGERILGID 532


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,852,768
Number of Sequences: 53049
Number of extensions: 691240
Number of successful extensions: 1840
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)