Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0469
         (714 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UD90 Cluster: Putative uncharacterized protein; n=3; ...    36   1.3  
UniRef50_Q64Z14 Cluster: Serine type site-specific recombinase; ...    34   4.0  
UniRef50_UPI000049A1B2 Cluster: mitotic inducer phosphatase; n=1...    33   7.0  
UniRef50_A6CMH5 Cluster: Laminarinase; n=1; Bacillus sp. SG-1|Re...    33   9.2  
UniRef50_Q9XTR0 Cluster: Putative uncharacterized protein; n=2; ...    33   9.2  

>UniRef50_Q4UD90 Cluster: Putative uncharacterized protein; n=3;
            Theileria|Rep: Putative uncharacterized protein -
            Theileria annulata
          Length = 1230

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 26/91 (28%), Positives = 40/91 (43%)
 Frame = +1

Query: 283  ILNSTVDNSA*GTRPLQTQSNDS*FGFTDPMAFDVYFGRRHL*LVWYDSTNRTRVNDCLI 462
            I+ S +      T     ++N   FG     + DVYF  R   LVWYD T   R      
Sbjct: 850  IMGSVISGKLISTHQKVRKTNLGCFGAKMDHSSDVYFEYRAPYLVWYDWTPNNRRFSLYT 909

Query: 463  QRESNFATIFSAVCQKLCVKSMANIEHNGTQ 555
            +R S+  T   +  + + VK++  +E  GT+
Sbjct: 910  RRYSDEQTTRLSEDKVMFVKNVKAVERAGTE 940


>UniRef50_Q64Z14 Cluster: Serine type site-specific recombinase;
           n=3; Bacteria|Rep: Serine type site-specific recombinase
           - Bacteroides fragilis
          Length = 613

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +1

Query: 457 LIQRESNFATIFSAVCQKLCVKSMANIEH--NGTQVYISRLNTS*LNI 594
           L Q E+N+A    A  Q++C+K M  +E    G QV  S++NT  LN+
Sbjct: 402 LEQVETNYALCSDAKKQEICIKVMTRLETEIRGLQVEYSKVNTEILNL 449


>UniRef50_UPI000049A1B2 Cluster: mitotic inducer phosphatase; n=1;
           Entamoeba histolytica HM-1:IMSS|Rep: mitotic inducer
           phosphatase - Entamoeba histolytica HM-1:IMSS
          Length = 208

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 306 IIYCRIQNSNRLRSHWL-FRELGRNRNYSEFGFEWFPDICQLGRYLRF 166
           + +C   + NR  + WL FR+L R +N  ++   W+PD+  L    R+
Sbjct: 104 VFHCEY-SQNRGPNQWLLFRQLDREKNKDQYPLIWYPDVFVLNGGYRY 150


>UniRef50_A6CMH5 Cluster: Laminarinase; n=1; Bacillus sp. SG-1|Rep:
           Laminarinase - Bacillus sp. SG-1
          Length = 281

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -1

Query: 357 KLTIVTLSLQRPSALSGIIYCRIQNSNRLR--SHWLFRELGRNRNYSEFGFEWFPD 196
           ++ I+    Q P+    +++   +N  R+R  SH++  E+   + + +FG  W PD
Sbjct: 161 EINIMDFLGQNPNEYVQVVHWENENGERMRDFSHYISEEIDFTKEFHDFGLIWEPD 216


>UniRef50_Q9XTR0 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 291

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
 Frame = +2

Query: 71  TLLRFMKNNLFGIVFLMNAT--QIFVFQATEYNLNRKYRPNWQISGNHSKPNSE*FRFRP 244
           +L  F ++++ G VFL+N+T  QI  F+ T+ NL     P   IS N+ K   + +R   
Sbjct: 27  SLGEFSESDVEGEVFLVNSTHLQIVNFRTTKTNL--PPIPFAFISSNNQKSTPKIYR-HF 83

Query: 245 SSRNSQWLRNL 277
           SS+N +WL  L
Sbjct: 84  SSQNGEWLSKL 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,240,955
Number of Sequences: 1657284
Number of extensions: 13942832
Number of successful extensions: 28285
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28285
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)