Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0466
         (673 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-...    32   0.82 
AY089397-1|AAL90135.1|  215|Drosophila melanogaster AT22194p pro...    30   2.5  
AE014297-2647|AAF55655.1|  215|Drosophila melanogaster CG5217-PA...    30   2.5  
AY070586-1|AAL48057.1|  421|Drosophila melanogaster RE68879p pro...    29   5.8  
AE014296-2119|AAS65016.1|  750|Drosophila melanogaster CG5620-PB...    29   5.8  
AE014296-2118|AAF49939.2|  750|Drosophila melanogaster CG5620-PA...    29   5.8  

>AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-PA
            protein.
          Length = 16223

 Score = 31.9 bits (69), Expect = 0.82
 Identities = 18/86 (20%), Positives = 33/86 (38%)
 Frame = +2

Query: 329  LKMSTTTCNCNSRDRVVYGGNSADSTREQWFFQPAKYENDVLFFIYNRQFNDALELGTIV 508
            L+    +C CN     +       ST      Q           + N +F+D +++ T  
Sbjct: 759  LEQGNDSCTCNCMTDFISTSIQISSTGPDQISQNKMGNQSQSVPLLNTEFSDLMKISTTY 818

Query: 509  TPRETARPLDTMVKSPVFLTSTRGSL 586
               +T   ++ + KSP  L++T   L
Sbjct: 819  KMHQTQNDIEKLSKSPPVLSTTSSGL 844


>AY089397-1|AAL90135.1|  215|Drosophila melanogaster AT22194p
           protein.
          Length = 215

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 247 NSSLEVHYLVGEQQSVLQDPQH*VQPVLEDEYDDLQ 354
           N S EVH    E Q V QDP    QP ++DE+D+++
Sbjct: 139 NESEEVH----ELQPVSQDPDTDPQPTVKDEHDEME 170


>AE014297-2647|AAF55655.1|  215|Drosophila melanogaster CG5217-PA
           protein.
          Length = 215

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 247 NSSLEVHYLVGEQQSVLQDPQH*VQPVLEDEYDDLQ 354
           N S EVH    E Q V QDP    QP ++DE+D+++
Sbjct: 139 NESEEVH----ELQPVSQDPDTDPQPTVKDEHDEME 170


>AY070586-1|AAL48057.1|  421|Drosophila melanogaster RE68879p
           protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = +1

Query: 430 RQVRKRRPVLHLQSPIQRCLGARYDRDASGDRKAVGHDGEVAGLPDIYSW 579
           R+  +RRPV   QSP  RC G R D D    R    H+       D Y W
Sbjct: 178 RRPTERRPVRRSQSPRDRCHGGR-DLDQRRQRNQ-RHNNSNKNEDDHYVW 225


>AE014296-2119|AAS65016.1|  750|Drosophila melanogaster CG5620-PB,
           isoform B protein.
          Length = 750

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 563 GRPATSPSCPTALRSPEASRSYR 495
           G P   P+ P+ LRSP  S SYR
Sbjct: 459 GGPGPGPNSPSLLRSPATSSSYR 481


>AE014296-2118|AAF49939.2|  750|Drosophila melanogaster CG5620-PA,
           isoform A protein.
          Length = 750

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 563 GRPATSPSCPTALRSPEASRSYR 495
           G P   P+ P+ LRSP  S SYR
Sbjct: 459 GGPGPGPNSPSLLRSPATSSSYR 481


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,399,597
Number of Sequences: 53049
Number of extensions: 591665
Number of successful extensions: 1562
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1562
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)