Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0464
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    74   6e-13
X13410-1|CAA31776.1|   34|Homo sapiens T-cell receptor beta-chai...    36   0.20 
BC053324-1|AAH53324.1|  514|Homo sapiens APCDD1 protein protein.       33   0.80 
AB104887-1|BAC65165.1|  514|Homo sapiens adenomatosis polyposis ...    33   0.80 
AB056722-1|BAC15563.1|  514|Homo sapiens DRAPC1 protein.               33   0.80 
BX842568-3|CAI40150.1| 1035|Homo sapiens family with sequence si...    30   7.5  
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   7.5  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   7.5  
AK125992-1|BAC86381.1|  910|Homo sapiens protein ( Homo sapiens ...    30   7.5  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -2

Query: 189 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 79
           MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>X13410-1|CAA31776.1|   34|Homo sapiens T-cell receptor beta-chain
           protein.
          Length = 34

 Score = 35.5 bits (78), Expect = 0.20
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = -3

Query: 581 ADNNFTQETAMTMITNSS 528
           ADNNFTQETAMTMIT S+
Sbjct: 1   ADNNFTQETAMTMITISA 18


>BC053324-1|AAH53324.1|  514|Homo sapiens APCDD1 protein protein.
          Length = 514

 Score = 33.5 bits (73), Expect = 0.80
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +3

Query: 492 TM*LYYRVSGYRARI---RNHGHSCFLCEIVIRSQFH 593
           T  ++YR S Y+  +   +NH H+C  C I+ RS  H
Sbjct: 240 TQRMFYRPSSYQPPLQNAKNHDHACIACRIIYRSDEH 276


>AB104887-1|BAC65165.1|  514|Homo sapiens adenomatosis polyposis
           coli down-regulated 1 protein.
          Length = 514

 Score = 33.5 bits (73), Expect = 0.80
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +3

Query: 492 TM*LYYRVSGYRARI---RNHGHSCFLCEIVIRSQFH 593
           T  ++YR S Y+  +   +NH H+C  C I+ RS  H
Sbjct: 240 TQRMFYRPSSYQPPLQNAKNHDHACIACRIIYRSDEH 276


>AB056722-1|BAC15563.1|  514|Homo sapiens DRAPC1 protein.
          Length = 514

 Score = 33.5 bits (73), Expect = 0.80
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +3

Query: 492 TM*LYYRVSGYRARI---RNHGHSCFLCEIVIRSQFH 593
           T  ++YR S Y+  +   +NH H+C  C I+ RS  H
Sbjct: 240 TQRMFYRPSSYQPPLQNAKNHDHACIACRIIYRSDEH 276


>BX842568-3|CAI40150.1| 1035|Homo sapiens family with sequence
           similarity 47, member C protein.
          Length = 1035

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 560 ETAMTMITNSSSVPRNAIVKSHCLEPPDSRGSTVSISLPDS 438
           E   T I+N  S P    V   CLEPP +RGS +    P++
Sbjct: 405 EPPKTRISNLRSEPPKIGVSHLCLEPPKTRGSHLRPEPPET 445


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 410 TPLRPKPA*PNPARICSLWSPESRE 484
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 410 TPLRPKPA*PNPARICSLWSPESRE 484
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AK125992-1|BAC86381.1|  910|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44004 fis, clone TESTI4023546, weakly  similar
           to Sialidase (EC 3.2.1.18). ).
          Length = 910

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 560 ETAMTMITNSSSVPRNAIVKSHCLEPPDSRGSTVSISLPDS 438
           E   T I+N  S P    V   CLEPP +RGS +    P++
Sbjct: 280 EPPKTRISNLRSEPPKIGVSHLCLEPPKTRGSHLRPEPPET 320


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,668,269
Number of Sequences: 237096
Number of extensions: 2266669
Number of successful extensions: 3594
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3594
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)