Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0464
         (736 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X51937-1|CAA36201.1|  984|Drosophila melanogaster protein ( Dros...    30   2.8  
X15469-1|CAA33496.1|  633|Drosophila melanogaster protein ( Dros...    30   2.8  
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    30   3.8  
BT016048-1|AAV36933.1|  407|Drosophila melanogaster LP19671p pro...    29   8.7  
AE014297-3544|AAF56295.1|  479|Drosophila melanogaster CG17782-P...    29   8.7  

>X51937-1|CAA36201.1|  984|Drosophila melanogaster protein (
           Drosophila melanogasterNOF-FB transposable element. ).
          Length = 984

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -3

Query: 515 NAIVKSHCLEPPDSR-GSTVSISLPDS 438
           ++I+K HCL  PD + G  +S+S+PD+
Sbjct: 110 SSILKGHCLVKPDEQCGIMISVSVPDT 136


>X15469-1|CAA33496.1|  633|Drosophila melanogaster protein (
           Drosophila melanogasterDNA for complete foldback (FB)
           transposable n.  ).
          Length = 633

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
 Frame = -3

Query: 515 NAIVKSHCLEPPDSR-GSTVSISLPDS 438
           ++I+K HCL  PD + G  +S+S+PD+
Sbjct: 182 SSILKGHCLVKPDEQCGIMISVSVPDT 208


>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 369 RSAECMNQMSETAVPLVLSSITIATTSHQ*G 277
           +  EC  Q+S  ++ LV+S+IT+AT +H  G
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYG 731


>BT016048-1|AAV36933.1|  407|Drosophila melanogaster LP19671p
           protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 501 LYYRVSGYRARIRNHGHSCFLCEIVIRSQFHTTYEP 608
           LY R+  Y  +  +HGH C L  +    Q  T +EP
Sbjct: 314 LYERIEKYLDKRGHHGHHCVLRTLCETGQKSTEHEP 349


>AE014297-3544|AAF56295.1|  479|Drosophila melanogaster CG17782-PA
           protein.
          Length = 479

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 501 LYYRVSGYRARIRNHGHSCFLCEIVIRSQFHTTYEP 608
           LY R+  Y  +  +HGH C L  +    Q  T +EP
Sbjct: 386 LYERIEKYLDKRGHHGHHCVLRTLCETGQKSTEHEP 421


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,915,280
Number of Sequences: 53049
Number of extensions: 667995
Number of successful extensions: 1328
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)