Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0461
         (704 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R8W6 Cluster: DnaJ domain, putative; n=4; Plasmodium ...    33   5.2  
UniRef50_UPI000049896A Cluster: hypothetical protein 43.t00029; ...    33   6.8  

>UniRef50_Q7R8W6 Cluster: DnaJ domain, putative; n=4; Plasmodium
           (Vinckeia)|Rep: DnaJ domain, putative - Plasmodium
           yoelii yoelii
          Length = 371

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = -3

Query: 291 FYILIVTPKLMSIVQH*NKTESI*NNS*KAQL*LDIGADIEVLIKPVKSISQNKHPQSHS 112
           FYI+ +     S++   N  E+I  N     L +   AD++ + K  K ++   HP  H+
Sbjct: 25  FYIIYIQKYTKSVINEKNAYENILGNDYYDILGVTKSADLDQITKAYKRLAMRWHPDKHT 84

Query: 111 ELNE 100
           + N+
Sbjct: 85  DEND 88


>UniRef50_UPI000049896A Cluster: hypothetical protein 43.t00029;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 43.t00029 - Entamoeba histolytica HM-1:IMSS
          Length = 185

 Score = 33.1 bits (72), Expect = 6.8
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 442 YAYYKTIPHKCHFNLETRLSGESSIDLWHYHKNNLKKFMCMLY 570
           Y  +K     C ++   R++ + S+ LW  H N+L  F C+L+
Sbjct: 87  YFVFKINNEVCKYSKHERINTDWSLYLWSEHDNSLPNFYCVLF 129


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,387,387
Number of Sequences: 1657284
Number of extensions: 12133669
Number of successful extensions: 22288
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22278
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)