Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0461
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    26   0.34 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.6  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.8  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 442 YAYYKTIPHKCHFNLET 492
           Y  Y  +PH+CH NL++
Sbjct: 339 YTMYFRMPHRCHGNLQS 355


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 442 YAYYKTIPHKCHFNLETRLSGESSIDLWHYHKNNLKK 552
           Y  Y  +PHKC+ N     S   S  +W    N L +
Sbjct: 331 YTLYFRMPHKCNGNAHNCPS--RSHPVWEIVMNELDR 365


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +1

Query: 442 YAYYKTIPHKCHFNLETRLSGESSIDLWHYHKNNLKK 552
           Y  Y  +PHKC+ N     S   S  +W    N L +
Sbjct: 338 YTLYFRMPHKCNGNAHNCPS--RSHPVWEIVMNELDR 372


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 103 VKFAVTLWMLILRYTFDWFYQNFYV 177
           +  A+ L  + L++TF W + + +V
Sbjct: 210 IVMALVLQFITLQHTFIWVFNDVFV 234


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 103 VKFAVTLWMLILRYTFDWFYQNFYV 177
           +  A+ L  + L++TF W + + +V
Sbjct: 210 IVMALVLQFITLQHTFIWVFNDVFV 234


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 103 VKFAVTLWMLILRYTFDWFYQNFYV 177
           +  A+ L  + L++TF W + + +V
Sbjct: 210 IVMALVLQFITLQHTFIWVFNDVFV 234


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 127 STKSQRT*RGRANCTIP 77
           S +SQR   GRA C  P
Sbjct: 278 SPRSQRRYTGRATCDCP 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,223
Number of Sequences: 336
Number of extensions: 3962
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)