Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0461
         (704 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   3.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   3.7  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   4.9  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              22   6.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   8.6  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 385 YQTISLSICRGYLVALFRTYAYYKTIPHKCHFNLETRL 498
           Y+     IC      LF+  A+ K IPH     LE ++
Sbjct: 227 YENAVSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQV 264


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 385 YQTISLSICRGYLVALFRTYAYYKTIPHKCHFNLETRL 498
           Y+     IC      LF+  A+ K IPH     LE ++
Sbjct: 227 YENAVSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQV 264


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +1

Query: 82  LYS*PSLVKFAVTLWMLILRYTFDWFYQNFYVCTN 186
           ++S P+++   + + M ILR + D   +NF  C++
Sbjct: 88  VFSSPTILISYIYILMAILRMSADGGCRNFSTCSS 122


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 586 VGCRCDLSLKFYICVIL*MR 645
           V   CD++L F +C++  MR
Sbjct: 128 VNDECDVALSFKLCMLKAMR 147


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 497 FQVNLA*ICGITIKIILR 550
           F++NL   CG  IK +LR
Sbjct: 464 FRINLGIECGYEIKKLLR 481


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,977
Number of Sequences: 438
Number of extensions: 4392
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)