Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0460
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          26   0.33 
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           26   0.33 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.44 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.3  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.4  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 365 DKTCTPKAFPAAMAGLSSPRSIATDA 288
           +K  TP++ PA  A   SP+S+A+ A
Sbjct: 149 NKVSTPRSSPAETASSLSPQSVASTA 174


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 365 DKTCTPKAFPAAMAGLSSPRSIATDA 288
           +K  TP++ PA  A   SP+S+A+ A
Sbjct: 140 NKVSTPRSSPAETASSLSPQSVASTA 165


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 398 NSAPTRRPPVPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSRPNT 261
           NSA +  PP  ++  +P   P  +   SSPRSI+ D L     PN+
Sbjct: 40  NSAASPAPP-EEEAASPT--PGDVPTPSSPRSISEDPLNCRDLPNS 82


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 416 LRCLLRNSAPTRRPPVPDKT 357
           +RC LR   P R+P  P  T
Sbjct: 105 VRCALRKHKPNRKPRTPFTT 124


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
 Frame = -3

Query: 389 PTRRPP--VPDKTCTPKAFPAAMAGLSSPRSIATDALQNCS 273
           P ++ P   P  + TP + P      S+P   +   + +CS
Sbjct: 66  PWKKSPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCS 106


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 346 FGVQVLSGTGGLRVGAEFLNKHLKYDTFYYS 438
           + +  L G   LR+G +   K  K D FY+S
Sbjct: 29  YAICKLIGLNTLRIGRKGELKQHKSDYFYFS 59


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 346 FGVQVLSGTGGLRVGAEFLNKHLKYDTFYYS 438
           + +  L G   LR+G +   K  K D FY+S
Sbjct: 29  YAICKLIGLNTLRIGRKGELKQHKSDYFYFS 59


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 302 CSLVRIVLPSPLEKLSVCKSCP 367
           C+L    LP    +L  C  CP
Sbjct: 489 CALTTRELPGETLRLFTCMECP 510


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +2

Query: 302 CSLVRIVLPSPLEKLSVCKSCP 367
           C+L    LP    +L  C  CP
Sbjct: 496 CALTTRELPGETLRLFTCMECP 517


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,488
Number of Sequences: 336
Number of extensions: 4501
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)