Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0457
(513 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0799 + 7734031-7735102,7735453-7735475 31 0.41
03_04_0006 + 16257288-16259522 31 0.72
06_03_0854 + 25400855-25403741,25406174-25407708 30 1.3
05_05_0272 - 23738514-23738817,23739382-23740748 29 1.7
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 29 2.2
04_03_0500 + 16585157-16585201,16586840-16586978,16587456-165875... 29 2.2
04_01_0416 - 5504415-5504590,5509032-5509116,5509190-5509322,550... 29 2.2
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 29 2.9
12_02_0077 - 13288916-13289659,13289689-13289691 28 5.1
10_02_0074 - 4965688-4966638,4966877-4966906,4968656-4968927,496... 28 5.1
04_03_0473 - 16332870-16332947,16333013-16333474,16333615-163337... 28 5.1
02_05_0726 - 31252210-31253166,31253667-31253840,31254320-312543... 27 6.7
02_05_0645 - 30596133-30596627,30596707-30596784 27 6.7
02_05_0597 + 30245455-30245767,30246693-30246760,30246851-302469... 27 6.7
01_01_0827 + 6443319-6446085,6446317-6446407,6446502-6448017,644... 27 6.7
08_01_0794 - 7687480-7687798,7687817-7688523 27 8.8
07_01_0989 + 8348706-8348882,8348988-8349028,8350071-8350120,835... 27 8.8
07_01_0694 - 5248381-5249118 27 8.8
01_06_1759 + 39689410-39689573,39689728-39689923,39690014-396901... 27 8.8
01_01_1195 - 9567023-9567789,9567871-9568120 27 8.8
>08_01_0799 + 7734031-7735102,7735453-7735475
Length = 364
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 281 PNRVSNETMK*WFFSDDRAKRSPTYATPLMSPSNARLESS 162
P V +ET F SDD +K +P YAT M+ SN +E+S
Sbjct: 99 PMSVYSETTHRMFNSDDSSKFAPPYAT-FMNRSNLEMEAS 137
>03_04_0006 + 16257288-16259522
Length = 744
Score = 30.7 bits (66), Expect = 0.72
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -2
Query: 227 AKRSP---TYATPLMSPSNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWE 75
A+RSP Y T L + ARL T PA SP +AV S + G W+
Sbjct: 162 ARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWD 215
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 227 AKRSPTYATPLMSPSNARLESSSTGSSFPADSPKPVPLAVVS 102
AKR+PT T P AR +++ +F +P P P +V+S
Sbjct: 475 AKRAPTAVTVGAPPPQARTPAAAPAKAF-VSAPAPAPSSVIS 515
>05_05_0272 - 23738514-23738817,23739382-23740748
Length = 556
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 464 GHLRYS-LTDVPPRSNSPPGSVLDRITREF*TATSVSDTSPLCTLGTKH 321
G RY+ +TDVPP N P V + IT EF T + +P ++ + H
Sbjct: 398 GVFRYNQMTDVPPAVNGPLHVVPNVITAEFRTFIEIIFENPEKSMDSVH 446
>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
8905437-8905690,8905785-8908799,8908889-8909001,
8909975-8910164,8910399-8910512,8910591-8910698,
8910941-8911073,8911206-8911408,8911626-8911826
Length = 1889
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 20 GSQMPRHLISDAHEWINEIPTVPIYYLAIPQPRERAWENQRGKKTLLSL 166
G+ PR + D EW N PT+ ++ +PRE Q+ K + L
Sbjct: 1393 GNCAPRTVECDEGEWYNNFPTIDENHVQRNKPREEQIFQQKLKPAIFIL 1441
>04_03_0500 +
16585157-16585201,16586840-16586978,16587456-16587577,
16588850-16588900,16589289-16589601,16592816-16593162
Length = 338
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 50 DAHEWINEIPTVPIYYLAIPQPRERAWENQRGKKTLLSLTLVWHWKET 193
D + +N +P YL + R AW+ Q T S+ L+ HW ET
Sbjct: 90 DQNIMMNALPRKMDLYLDLKFVRNLAWKMQTCYDTNESIFLIRHWLET 137
>04_01_0416 -
5504415-5504590,5509032-5509116,5509190-5509322,
5509426-5510312
Length = 426
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 200 PLMSPSNARLESSSTGSSFPADSPKPVPLAVVSLDS 93
PL+ P+ AR SSTGSSFP S P ++ L S
Sbjct: 47 PLIHPTPARF-ISSTGSSFPPYSEPPPSAPMLELGS 81
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 28.7 bits (61), Expect = 2.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 348 TTLHAWNETPCARRYY 301
TT AW ETPCA R++
Sbjct: 560 TTTEAWVETPCAHRFH 575
>12_02_0077 - 13288916-13289659,13289689-13289691
Length = 248
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 170 ESSSTGSSFPADSPKPVPLAVVSLDSR 90
++ S G S P DS + VP+ VV+L R
Sbjct: 3 DNQSLGKSLPKDSRRHVPVGVVALKKR 29
>10_02_0074 -
4965688-4966638,4966877-4966906,4968656-4968927,
4969092-4969329
Length = 496
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 20 GSQMPRHLISDAHEWINEIPTVPIYYLAIPQPRERA 127
GS H+ D H+W E T+P + P E A
Sbjct: 461 GSNQGLHICKDGHQWPLEESTMPTVECVLQHPGESA 496
>04_03_0473 -
16332870-16332947,16333013-16333474,16333615-16333739,
16333953-16334022
Length = 244
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 83 VPIYYLAIPQPRERAWENQRGKKTLLS 163
VP +L IP+ R R W RGK L++
Sbjct: 44 VPAPFLDIPEQRARNWARARGKMGLVA 70
>02_05_0726 -
31252210-31253166,31253667-31253840,31254320-31254364,
31254463-31254573,31254669-31254746,31255170-31255234,
31255358-31255733,31256891-31257035,31257308-31257462,
31259036-31259182
Length = 750
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 218 SPTYATPLMSPSNARLESSSTGSSFPADSPKPVP 117
SP Y P ++ N + S +T S P PK P
Sbjct: 159 SPKYVKPAVAKQNGEVVSRATKSDAPVSKPKVDP 192
>02_05_0645 - 30596133-30596627,30596707-30596784
Length = 190
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 236 DDRAKRSPTYATPLMSPSNARLESSSTGSSFPAD 135
D A PT ++ SPS++ +++ STGSSF D
Sbjct: 2 DGDAGMIPTSSSAETSPSSSDVDTESTGSSFFRD 35
>02_05_0597 +
30245455-30245767,30246693-30246760,30246851-30246939,
30247047-30247212,30247296-30247585,30247692-30247896,
30248013-30248170,30248352-30248595
Length = 510
Score = 27.5 bits (58), Expect = 6.7
Identities = 9/42 (21%), Positives = 22/42 (52%)
Frame = -2
Query: 395 RITREF*TATSVSDTSPLCTLGTKHRAPADIIDRAPLPPNRV 270
R+ + + + + + + T+ P ++++APLPP R+
Sbjct: 65 RVLKGWPSCRTAQEAASAALAATRLPMPVPVVEKAPLPPKRI 106
>01_01_0827 +
6443319-6446085,6446317-6446407,6446502-6448017,
6448164-6448243,6449045-6449129,6449221-6449312,
6449388-6449456,6449544-6449580,6449662-6449744,
6450427-6450873,6450978-6451014,6451101-6451158,
6451243-6451382,6451610-6451675,6451794-6451908,
6453261-6453299,6453482-6453543
Length = 1927
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = -2
Query: 362 VSDTSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMK*WFFSDDRAKRSPTYATPLMSPS 183
+S+ + L + P + ID P + + + DD+ ++P ATP+ PS
Sbjct: 64 ISNDAGLTEVVGSSAGPTECIDLNKTPARKPKKKKHRPKVLKDDKPSKTPKSATPI--PS 121
Query: 182 NARLESSS 159
++E S
Sbjct: 122 TEKVEKPS 129
>08_01_0794 - 7687480-7687798,7687817-7688523
Length = 341
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -2
Query: 281 PNRVSNETMK*WFFSDDRAKRSPTYATPLMSPSNARLESS 162
P V +ET F S+D +K +P YAT M S +E+S
Sbjct: 98 PKSVYSETTHRMFNSEDSSKFAPHYAT-FMHRSQLEMEAS 136
>07_01_0989 +
8348706-8348882,8348988-8349028,8350071-8350120,
8350502-8350646,8351570-8351626,8352141-8352261,
8352436-8352945,8353242-8353289
Length = 382
Score = 27.1 bits (57), Expect = 8.8
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Frame = -2
Query: 503 APREVSVLAELALGHLRYSLTD--VPPRSNSPPGSVLDRITREF*TATSVSDTSPLCTLG 330
AP +S+ A+ HL S T + P + G+V++R + + S SPL +
Sbjct: 227 APTSISISQPPAVHHLLPSQTSSVISPDVHGGTGAVVNRSA----SLLNPSLFSPLTSSQ 282
Query: 329 TKHRAPADIIDRAPLPPNRVSNETMK*WF---FSDDRAKRSPTYATPLMSPSNARLESSS 159
T + AP R++ + F A SP Y TPL+ P S S
Sbjct: 283 TTMARTNPVAPTAPPQHPRITQQPHSAPLLQPFPLPTASPSPPYGTPLLQPFPPPNPSPS 342
Query: 158 TGSSFPADSP 129
S+ P SP
Sbjct: 343 LASA-PVYSP 351
>07_01_0694 - 5248381-5249118
Length = 245
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2
Query: 197 LMSPSNARLESSSTGSSFPADSPKPVPLA 111
L S S A S++T S PA+SP P P A
Sbjct: 55 LASDSPAAPPSTTTSSDEPAESPPPPPAA 83
>01_06_1759 +
39689410-39689573,39689728-39689923,39690014-39690103,
39690221-39690277,39690391-39690460,39690747-39690811,
39691408-39691462,39691704-39691831,39691919-39691950,
39692205-39692274,39692723-39692824,39692921-39693010,
39693084-39693232,39693620-39693731,39695332-39695412,
39695481-39695705,39695815-39695937,39696021-39696137
Length = 641
Score = 27.1 bits (57), Expect = 8.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 470 ALGHLRYSLTDVPPRSNSPPGSVLDRITR 384
ALGH+ L + P ++ PP +D ++
Sbjct: 494 ALGHIELDLPEAPEKAPKPPAQAVDPFSK 522
>01_01_1195 - 9567023-9567789,9567871-9568120
Length = 338
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/65 (33%), Positives = 26/65 (40%)
Frame = -2
Query: 293 APLPPNRVSNETMK*WFFSDDRAKRSPTYATPLMSPSNARLESSSTGSSFPADSPKPVPL 114
A L P R N W R R + A PS SS+ S PA +P P P
Sbjct: 127 ARLFPGRTDNAVKNHWHVLMARRHREQSGAFRRRKPS------SSSASPAPAPAPPPPPQ 180
Query: 113 AVVSL 99
VV+L
Sbjct: 181 PVVAL 185
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,799,333
Number of Sequences: 37544
Number of extensions: 338395
Number of successful extensions: 1301
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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