Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0457
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z81540-9|CAD89742.1| 740|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC006712-8|AAU20838.1| 450|Caenorhabditis elegans Hypothetical ... 29 2.6
U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z69883-6|CAA93744.2| 461|Caenorhabditis elegans Hypothetical pr... 28 4.5
U41036-9|ABA61867.1| 245|Caenorhabditis elegans Dopamine recept... 28 4.5
U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine recept... 28 4.5
U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine recept... 28 4.5
U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine recept... 28 4.5
AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein. 28 4.5
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 27 6.0
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 27 6.0
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 6.0
AC024790-11|AAF60631.1| 199|Caenorhabditis elegans Hypothetical... 27 6.0
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 7.9
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 7.9
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF067940-7|AAC19206.1| 116|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical
protein F27E5.3 protein.
Length = 490
Score = 32.3 bits (70), Expect = 0.21
Identities = 26/87 (29%), Positives = 37/87 (42%)
Frame = -2
Query: 410 GSVLDRITREF*TATSVSDTSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMK*WFFSDD 231
G+ D TR T+ S TS +P D P PP S++ K DD
Sbjct: 306 GNSTDPTTRSN-TSNVPSGTSEASITNPILHSPPSKFDNIPSPPKAFSDDLRK---SPDD 361
Query: 230 RAKRSPTYATPLMSPSNARLESSSTGS 150
K++P Y ++SP ++SS GS
Sbjct: 362 DVKQNPQYGMDIVSPVQL-VKSSDKGS 387
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 242 FSDDRAKRSPTYATPLMSPSNARLESSSTGSSFPADSPKP 123
F DD K ++ S + ESSSTGSS +D P+P
Sbjct: 1429 FLDDEEKTITDNSSSASSEDSDSDESSSTGSSSSSDDPRP 1468
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 242 FSDDRAKRSPTYATPLMSPSNARLESSSTGSSFPADSPKP 123
F DD K ++ S + ESSSTGSS +D P+P
Sbjct: 1429 FLDDEEKTITDNSSSASSEDSDSDESSSTGSSSSSDDPRP 1468
>Z81540-9|CAD89742.1| 740|Caenorhabditis elegans Hypothetical
protein F46B3.17 protein.
Length = 740
Score = 29.1 bits (62), Expect = 2.0
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -2
Query: 437 VPPRSNSPPGSVLDRITREF*TATSVSDTSPLCTLGTKHRAPADII-DRAPLPPNRV 270
VPP++ P + + + TSVSD PL + GT H PA RA LP V
Sbjct: 520 VPPKAQFPATFAIAQAVTSENSDTSVSDPEPLDS-GTGHSRPALFAPPRAQLPSQSV 575
>AC006712-8|AAU20838.1| 450|Caenorhabditis elegans Hypothetical
protein Y119C1B.3 protein.
Length = 450
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 430 PGQTPRLAVSSTGSRGSFKRRRAFPTRHHSARLER 326
P +TP+ SS S +R + FP HH RL+R
Sbjct: 409 PTRTPKQRRSSRIRSISDEREQLFPRHHHGRRLDR 443
>U00055-5|AAL06044.4| 1182|Caenorhabditis elegans Hypothetical
protein R02F2.2 protein.
Length = 1182
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -2
Query: 197 LMSPSNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR 69
+++P++A SST SS P P+P A VS +R + SR
Sbjct: 1 MLNPNDADDSDSSTDSSPPVAVPRPKRSATVSPSTRNSFYNSR 43
>Z69883-6|CAA93744.2| 461|Caenorhabditis elegans Hypothetical
protein C27C12.2 protein.
Length = 461
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = -2
Query: 461 HLRYSLTDVPPRSNSPPGSVLDRITREF*TATSVSDT 351
HL SL + P+SNS P +V+ R+ R T TS S T
Sbjct: 248 HLGSSLQNEHPQSNSRPSTVIPRVQR---TNTSASLT 281
>U41036-9|ABA61867.1| 245|Caenorhabditis elegans Dopamine receptor
protein 3, isoformd protein.
Length = 245
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 95 YLAIPQPRERAWENQRGKKTLLSLTLVW 178
Y+AI P A RG + ++S+T+VW
Sbjct: 106 YIAIGHPISYAQYGARGGRAMISITIVW 133
>U41036-8|ABA61866.1| 590|Caenorhabditis elegans Dopamine receptor
protein 3, isoformc protein.
Length = 590
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 95 YLAIPQPRERAWENQRGKKTLLSLTLVW 178
Y+AI P A RG + ++S+T+VW
Sbjct: 106 YIAIGHPISYAQYGARGGRAMISITIVW 133
>U41036-7|ABA61865.1| 607|Caenorhabditis elegans Dopamine receptor
protein 3, isoformb protein.
Length = 607
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 95 YLAIPQPRERAWENQRGKKTLLSLTLVW 178
Y+AI P A RG + ++S+T+VW
Sbjct: 121 YIAIGHPISYAQYGARGGRAMISITIVW 148
>U41036-6|ABA61864.1| 605|Caenorhabditis elegans Dopamine receptor
protein 3, isoforma protein.
Length = 605
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 95 YLAIPQPRERAWENQRGKKTLLSLTLVW 178
Y+AI P A RG + ++S+T+VW
Sbjct: 121 YIAIGHPISYAQYGARGGRAMISITIVW 148
>AY485309-1|AAR37416.1| 607|Caenorhabditis elegans DOP-3 protein.
Length = 607
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 95 YLAIPQPRERAWENQRGKKTLLSLTLVW 178
Y+AI P A RG + ++S+T+VW
Sbjct: 121 YIAIGHPISYAQYGARGGRAMISITIVW 148
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 242 FSDDRAKRSPTYATPLMSPSNARLESSSTGSSFPADSPKPVP 117
FSDD A T A P++ + ESSS S + K P
Sbjct: 286 FSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEKPAAKSTP 327
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -2
Query: 242 FSDDRAKRSPTYATPLMSPSNARLESSSTGSSFPADSPKPVP 117
FSDD A T A P++ + ESSS S + K P
Sbjct: 561 FSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEKPAAKSTP 602
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical protein
ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 100 SDTTAKGTGLGESAGK-EDPVELDSSLALEGDMRG 201
S TTA G+G G S+G D V + AL GD G
Sbjct: 1156 SGTTASGSGSGGSSGTGSDGVNSGKTTALNGDGTG 1190
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 100 SDTTAKGTGLGESAGK-EDPVELDSSLALEGDMRG 201
S TTA G+G G S+G D V + AL GD G
Sbjct: 1156 SGTTASGSGSGGSSGTGSDGVNSGKTTALNGDGTG 1190
>AC024790-11|AAF60631.1| 199|Caenorhabditis elegans Hypothetical
protein Y47D7A.12 protein.
Length = 199
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = -2
Query: 329 TKHRAPADI--IDRAPLPPNRVSNETMK*WFFSDDRAKRSPTYATPLMSPSNARL-ESSS 159
TKH P + + PLPP + + SDD + S A+P P++A++ SSS
Sbjct: 52 TKHSFPQNSAPVTAPPLPPPPAPSG-----YSSDDASVTSNVAASPPAPPTDAQIVGSSS 106
Query: 158 TGSSFPADSP 129
+ +++ SP
Sbjct: 107 SSTNYGGSSP 116
>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical protein
C27B7.4 protein.
Length = 1274
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 233 DRAKRSPTYATPLMSPSNARLESSSTGSSFPADSPKPVPL 114
DR +R Y PL S++ +++ GSS P PVP+
Sbjct: 1024 DRERRMENY-DPLSGLSSSNFYNNAPGSSMGMMGPPPVPM 1062
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 374 TATSVSDTSPLCTLGTKHRAPADIIDRAPLPPNRVSNET 258
T+ + TSP T+GT APA++ P N S+ T
Sbjct: 623 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTT 661
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 374 TATSVSDTSPLCTLGTKHRAPADIIDRAPLPPNRVSNET 258
T+ + TSP T+GT APA++ P N S+ T
Sbjct: 679 TSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTT 717
>AF067940-7|AAC19206.1| 116|Caenorhabditis elegans Hypothetical
protein F36F12.7 protein.
Length = 116
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -2
Query: 371 ATSVSDTSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMK*WFFSDDRAKRSP 213
A V+DT P + + R P+ + +P + VS+ ++ AK+SP
Sbjct: 32 AKPVADTPPAAMIAPRSRTPSPGAGKRSVPRDGVSSSVSSSTVSKNEPAKKSP 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,752,755
Number of Sequences: 27780
Number of extensions: 252276
Number of successful extensions: 760
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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