Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0455
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   1.5  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   4.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   5.9  
AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.          23   7.9  
AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    23   7.9  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 45  DVQGDDGRPAYGDGKDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVLGVG 203
           D  GD GRPAY    D +  +V        +  ++Y   L TE ++ L+ G G
Sbjct: 101 DRNGDGGRPAYSGNSDPSMDQVKTD-----KPRELYIPPLPTE-DESLIFGSG 147


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 119 LPADSRACLVLAVAVGRSAIVALNIIAQ 36
           LP DS   L L V +  S  V LN++A+
Sbjct: 255 LPPDSGEKLTLGVTILLSLTVFLNLVAE 282


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 193 WESALTGTATIWPS 234
           W S  TGTA IW S
Sbjct: 45  WVSDSTGTAAIWAS 58


>AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 272 LQPAKYDNDVLFYIYNREYSKALTLSRTVEP 364
           LQ   + ND+    +NRE + + T+S    P
Sbjct: 41  LQDKSHHNDIALIRFNREINYSSTISAICLP 71


>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -1

Query: 259 SELSTLLTPKAI--WSPFQLVPTPNTKYWLRSV 167
           +++  L+T  A+  W  ++L P P  + WL  V
Sbjct: 153 ADICLLVTVNALTLWLGYELAPYPRIRDWLGRV 185


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,007
Number of Sequences: 2352
Number of extensions: 8936
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)