Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0455
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z75543-5|CAA99872.2|  270|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    28   4.5  
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ...    28   4.5  

>U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical
           protein T12A2.15b protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 81  DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 179
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152


>U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical
           protein T12A2.15a protein.
          Length = 713

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 81  DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 179
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643


>Z77670-1|CAB01247.1|  484|Caenorhabditis elegans Hypothetical
           protein W05E10.1 protein.
          Length = 484

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -1

Query: 478 WFVVETLYYNLESLYT--PSVMFGTSDYSAVVSPGHAVT 368
           WFV++T+  N+ESL +     M+  + + A+V  G+  T
Sbjct: 260 WFVIQTIAVNIESLCSVFTIAMYNWTSHQAIVYGGYIET 298


>Z75543-5|CAA99872.2|  270|Caenorhabditis elegans Hypothetical
           protein K01D12.5 protein.
          Length = 270

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = -1

Query: 487 HSHWFVVETLYYNLESLYTPSVMFGTSDYSAVVSPGHAVTRGLNRPRQCQSLA 329
           +  +    T Y N++++  P  M+G++  S VVS G++ + G N+     ++A
Sbjct: 83  YPQYLPTHTGYSNIQTVGQPYQMYGSAPGSNVVSGGNSESYGYNQQAPVPTVA 135


>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
           protein C44H9.4 protein.
          Length = 1099

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
 Frame = +3

Query: 72  AYGDGKDKTSPRVSWKLIALWENNK---VYFKILNTERNQYLVLGVGTNWNGDH 224
           ++G   +   PR  ++ I+ +   +    YF++L+ E N+Y+++    N +G H
Sbjct: 129 SWGPNFNSPKPRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLH 182


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 437 LYPKRNVRDFRLLCRCIPRPCGDPRAQPSSTVSKP 333
           LY K    D  + C C+    G+P+   S+T  KP
Sbjct: 83  LYDKVQCYDVSIYCWCVDELSGEPKLGSSTTRGKP 117


>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
           presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 448 LESLYTPSVMFGTSDYSAVVSPGHAVTRGLNRPRQC 341
           L+++   S+  G S   AV   GH  T GLN   QC
Sbjct: 610 LDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQC 645


>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
           protein F07B7.12 protein.
          Length = 1900

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 448 LESLYTPSVMFGTSDYSAVVSPGHAVTRGLNRPRQC 341
           L+++   S+  G S   AV   GH  T GLN   QC
Sbjct: 610 LDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQC 645


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,991,445
Number of Sequences: 27780
Number of extensions: 188211
Number of successful extensions: 437
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)