Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0452
         (767 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7LY41 Cluster: Putative uncharacterized protein; n=1; ...    36   1.5  
UniRef50_A2E4D1 Cluster: Putative uncharacterized protein; n=1; ...    34   4.5  

>UniRef50_A7LY41 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides ovatus ATCC 8483|Rep: Putative
           uncharacterized protein - Bacteroides ovatus ATCC 8483
          Length = 1320

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 481 NYLTRQVKSGWGIVSIGHCVLDIC 410
           NY+TR V+ GW   SIG  V+DIC
Sbjct: 95  NYITRNVRHGWAHDSIGKSVIDIC 118


>UniRef50_A2E4D1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1310

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = -2

Query: 646 IIGIFKNVENHNVCPFEVFLMSLCNIRNNMLTVKLLLKHSYALNSTLI 503
           II +  +    N+C F   L S+    NN++T     K  Y LNSTL+
Sbjct: 346 IIDLIYDAYTQNICHFTSILRSISKCANNVITYVKSPKFYYLLNSTLL 393


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,759,043
Number of Sequences: 1657284
Number of extensions: 13066142
Number of successful extensions: 28857
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28845
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)