Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0452
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75526-3|CAA99769.1|  578|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p...    28   6.4  
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ...    28   6.4  
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ...    28   6.4  
AL117204-3|CAB55147.2|  675|Caenorhabditis elegans Hypothetical ...    28   8.4  

>Z75526-3|CAA99769.1|  578|Caenorhabditis elegans Hypothetical
           protein C06H2.3 protein.
          Length = 578

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 95  EIWREVFSNI*YCKVFVMTDVNKLDIFYK 9
           E WR+++S I +C+ F+M   NK +I  K
Sbjct: 259 ENWRKLYSLICFCQSFMMFKQNKYEIAIK 287


>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
 Frame = -2

Query: 649  YIIGIFKNVENHNVCPFEVFLMSLCNIRNNMLTVKLLLKHSYALNSTLI-----ADLVTL 485
            Y++  F   E+ N    ++ L+   + R  ML  KL++K +  +   L      + ++T+
Sbjct: 1288 YLLDAFDLKEHANT---QIKLLPCIDRRILMLLAKLVIKPNIVIIDQLEMFLPHSKMMTV 1344

Query: 484  WNYLTRQVKSGWGIVSIGH 428
            W++  R  K+G GI+   H
Sbjct: 1345 WSFCARLRKNGLGIIYTSH 1363


>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
 Frame = -2

Query: 649  YIIGIFKNVENHNVCPFEVFLMSLCNIRNNMLTVKLLLKHSYALNSTLI-----ADLVTL 485
            Y++  F   E+ N    ++ L+   + R  ML  KL++K +  +   L      + ++T+
Sbjct: 1288 YLLDAFDLKEHANT---QIKLLPCIDRRILMLLAKLVIKPNIVIIDQLEMFLPHSKMMTV 1344

Query: 484  WNYLTRQVKSGWGIVSIGH 428
            W++  R  K+G GI+   H
Sbjct: 1345 WSFCARLRKNGLGIIYTSH 1363


>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
            protein C24F3.5 protein.
          Length = 1479

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
 Frame = -2

Query: 649  YIIGIFKNVENHNVCPFEVFLMSLCNIRNNMLTVKLLLKHSYALNSTLI-----ADLVTL 485
            Y++  F   E+ N    ++ L+   + R  ML  KL++K +  +   L      + ++T+
Sbjct: 1288 YLLDAFDLKEHANT---QIKLLPCIDRRILMLLAKLVIKPNIVIIDQLEMFLPHSKMMTV 1344

Query: 484  WNYLTRQVKSGWGIVSIGH 428
            W++  R  K+G GI+   H
Sbjct: 1345 WSFCARLRKNGLGIIYTSH 1363


>AL117204-3|CAB55147.2|  675|Caenorhabditis elegans Hypothetical
           protein Y116A8C.5 protein.
          Length = 675

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 367 WVKKSILLFNAYNRFLKKRKTSEVKSE 287
           + KK+  + N   RFLKK +TS  KSE
Sbjct: 81  YTKKTKTINNIMKRFLKKNETSRSKSE 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,626,726
Number of Sequences: 27780
Number of extensions: 341894
Number of successful extensions: 707
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)